| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1627 |
|---|
| Symbol | |
|---|
| ID | 4787251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 1756407 |
|---|
| End bp | 1759598 |
|---|
| Gene Length | 3192 bp |
|---|
| Protein Length | 1063 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640090195 |
|---|
| Product | putative cation efflux system transmembrane protein |
|---|
| Protein accession | YP_001020824 |
|---|
| Protein GI | 124266820 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3696] Putative silver efflux pump |
|---|
| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.152152 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCCG AGCTGATCCG CTGGTCCATC GTCAACCGCT TCCTCGTGCT GCTGGCGACG
GTGATCGTCA CAGCCTGGGG CCTGTGGGCC GTGCAGCGCA CGCCGCTGGA CGCGCTGCCC
GACCTGTCGG ACGTGCAGGT CATCATCCGC ACGCCGTACC CAGGGCAGGC CCCTCGCATC
GTCGAGAACC AGGTCACCTA CCCGTTGACG ACGACGATGC TGTCGGTGCC CGGCGCCAAG
GTCGTGCGCG GCTACTCGTT TTTCGGCGAC AGCTTCGTCT ATGTGCTGTT CGACGACGGC
ACCGACCCGT ACTGGGCGCG CTCGCGGGTG CTGGAGTACT TGAACCAGGT GCAGTCACGC
TTGCCCGCCG CTGCGAAGCC CGCGCTCGGG CCGGATGCGA CCGGCGTGGG CTGGATCTAC
CAGTACGCGC TGGTGGACCG CAGCGGCACG ATGGACGCGG GGCAACTACG CGCGCTGCAG
GACTGGTTCC TGAAGTACGA GCTGAAGACG GTGCCGAACG TGGCCGAGGT GGCGTCGGTC
GGTGGCATGG TGCGCCAGTA CCAGGTGCTG CTCGATCCGG ACAAGCTGGC GGCCTACAAC
GTGCCGCATG GCGCCGTGAT CGACGCGATC CGCAACGCCA ACCAGGAGGC CGGCGGCTCG
GTGCTCGAGC TGGGCGAAGC GGAGTACGTG GTGCGCGCCT CGGGCCTGCT GGCGACGTTG
GACGACTTCC GCAAGATCCC CTTGAGCGCC ACCGATGCCG GCGTCAGCGT GCGACTGGGC
GACGTGGCGC GCATCCAGGT GGGGCCCGAG ATGCGCCGCG GCATCGGCGA GCTCGACGGG
GAGGGCGAGG CCACCGGTGG CGTGATCGTG ATGCGCTCGG GCAAGAACGC GCTGGAGACG
ATTGCAGCCG TCAAGACCAA GATCGCATCG CTGCAGGCCA GCCTGCCGAA GGGCGTGGAG
ATCGTGCCGA CCTACGACCG CTCCAGCCTG ATCGAACGGG CCGTCGAGAA CCTCAGCCAC
AAGCTGATCG AGGAGTTCAT CGTCGTCGCG CTGGTGTGCG TGGTATTCCT GTTCCACCTG
CGCTCGGCGT TTGTCGCCAT CGTCACGCTG CCGCTCGGCA TCCTGGCGAG TTTCATCGTC
ATGCACTACC AGGGGGTGAA CGCCAACGTG ATGTCGCTCG GTGGCATCGC CATCGCCATC
GGCGCGATGG TCGATGCGGC GGTGGTGATG ATCGAGAACG CGCACAAGCA CATCGAGGCC
TGGCGTCACG AGCACCCGGG CGAGGATTTG AAGGGTGAGG CGCAATGGCG CGTCGTCGGC
GACGCCGCGG TCGAGGTCGG CCCGGCGCTG TTCTTCTCGC TGTTGATCAT CACGCTGAGC
TTCATCCCGG TGTTCACGCT GGAGGCGCAG GAAGGGCGGT TGTTCTCACC GCTGGCCTAC
ACCAAGACCT ATGCGATGGC GGCATCGGCC GGGCTCGCGG TGACGCTGGT GCCGGTGCTG
ATGGGTTACC TGATCCGCGG CCGCATCCCC GACGAGCGGC GCAACCCGCT GAACCGCGCG
CTAATCGCCA TCTACCGGCC GCTGCTCGAC GGTGTGCTGG CGTGGCCGAA GGCGACGATC
GCGGTGGCGC TGCTGCTGCT CGCCAGCACC GCCTGGCCGA TCCTGAAGAT CGGCGGCGAG
TTCATGCCGC CGCTGGACGA GGGTGACCTG CTCTACATGC CGACCGCGCT GCCGGGGCTG
TCGGCCGGCA AGGCCGCCGA GCTGCTGCAG CAGACCGATC GGCTGATCAA GACGCTGCCG
GAAGTGCAAT CGGTCTACGG CAAGGCCGGC CGCGCCGAGA CCGCCACCGA CCCGGCGCCG
ATGGAGATGT TCGAGACCAC GATCCAGTTC AAGCCGAAGG ACCAGTGGCG TGATGGCATG
ACGAGCGACC GGCTGGTCGA GGAGCTGGAC CGCATCGTCA AGGTGCCGGG GCTGTCAAAC
ATCTGGGTGC CGCCGATCCG CAACCGCATC GACATGCTGG CCACCGGCAT CAAGAGCCCG
GTCGGAGTGA AGGTGGCCGG CACCGACCTG GCCGAGATCG ACCGCATCGC CAGTGAGGTC
GAGAAGGCGG TGAGGGGCGT GCCCGGCGTC AGCAGCGCGC TGGCGGAAAG GCTGACGGGT
GGGCGCTACG TCGACGTCAA CATCAACCGC GACACGGCGG CGCGCTACGG CATGAACATC
GCCGACGTGC AATCGGTCAT CAGCACCGCG GTCGGCGGCG ACAACGTCGG CGAGACGGTC
GAGGGCCTGC AGCGCTTCCC GATCAACGTG CGCTACCCAC GGGAAGTGCG CGATTCATTG
GAGAAGCTGC GCAAGCTGCC GTTCGTCACC CCGCGTGGTG CGCGCATCGT GTTGTCCGAC
GTGGCCGAGC TTCGCATCAG CGACGGCCCG CCGATGCTGC GCAGCGAGAA CGCACGCCTG
GCCGGCTTCG TCTACGTCGA CATCCGTGGG CGCGACCTGA AGTCCGCAGT GATCGACATG
CAGAAGGTGG TGGCCGAGCA GGTGAAGCTG ACACCGGGCT ACTCGGTCTC GTGGTCGGGT
CAGTTCGAGT TCCTGGAACG CGCGACGGCC AAGCTCAAGG TCGTCGTGCC CTTCACACTG
GGCATCATCG TCGTGCTGCT CTACCTGACC TTCCGCCGCT TCGACGAGGC GCTGCTGATC
CTGGCCACGC TGCCGTTTGC GCTGATCGGG GGCTTCTGGC TGCTCTACCT GCTGGGCTAC
AACCTGAGCG TGGCGGGCGC CATAGGCTTC ATCGCGCTGG CCGGCGTGGC GGCCGAGTTC
GGCGTCATCA TGCTGCTCTA CCTGAAGCAG GCCTGGGAGG CGCGGTTGGC GCGCGGGCTG
AGCAGCGATG CCGATCTCAT GGATGCGATC CGCGAAGGCG CCGTGCTGCG CGTGCGACCG
AAGGCGATGA CGGTGGCCGT CATCATTGCC GGCCTGGTGC CCATCATGTT CGGCGGCGGC
ACAGGCTCCG AGGTGATGCA GCGCATTGCC GCGCCGATGG TCGGCGGTAT GGTGACTGCG
CCACTGCTGT CGATGTTCGT TGTGCCGGCG ATCTACCGGC TGGTTCGCAG ACGCAGGCGC
GCCAGTGCTG GCGAAGCCGC CGCCGTTCCC GGCAAATCTT CAATCCCGAC TCCGGCGCCG
TCAGCAGCAT GA
|
|---|
| Protein sequence | MIAELIRWSI VNRFLVLLAT VIVTAWGLWA VQRTPLDALP DLSDVQVIIR TPYPGQAPRI
VENQVTYPLT TTMLSVPGAK VVRGYSFFGD SFVYVLFDDG TDPYWARSRV LEYLNQVQSR
LPAAAKPALG PDATGVGWIY QYALVDRSGT MDAGQLRALQ DWFLKYELKT VPNVAEVASV
GGMVRQYQVL LDPDKLAAYN VPHGAVIDAI RNANQEAGGS VLELGEAEYV VRASGLLATL
DDFRKIPLSA TDAGVSVRLG DVARIQVGPE MRRGIGELDG EGEATGGVIV MRSGKNALET
IAAVKTKIAS LQASLPKGVE IVPTYDRSSL IERAVENLSH KLIEEFIVVA LVCVVFLFHL
RSAFVAIVTL PLGILASFIV MHYQGVNANV MSLGGIAIAI GAMVDAAVVM IENAHKHIEA
WRHEHPGEDL KGEAQWRVVG DAAVEVGPAL FFSLLIITLS FIPVFTLEAQ EGRLFSPLAY
TKTYAMAASA GLAVTLVPVL MGYLIRGRIP DERRNPLNRA LIAIYRPLLD GVLAWPKATI
AVALLLLAST AWPILKIGGE FMPPLDEGDL LYMPTALPGL SAGKAAELLQ QTDRLIKTLP
EVQSVYGKAG RAETATDPAP MEMFETTIQF KPKDQWRDGM TSDRLVEELD RIVKVPGLSN
IWVPPIRNRI DMLATGIKSP VGVKVAGTDL AEIDRIASEV EKAVRGVPGV SSALAERLTG
GRYVDVNINR DTAARYGMNI ADVQSVISTA VGGDNVGETV EGLQRFPINV RYPREVRDSL
EKLRKLPFVT PRGARIVLSD VAELRISDGP PMLRSENARL AGFVYVDIRG RDLKSAVIDM
QKVVAEQVKL TPGYSVSWSG QFEFLERATA KLKVVVPFTL GIIVVLLYLT FRRFDEALLI
LATLPFALIG GFWLLYLLGY NLSVAGAIGF IALAGVAAEF GVIMLLYLKQ AWEARLARGL
SSDADLMDAI REGAVLRVRP KAMTVAVIIA GLVPIMFGGG TGSEVMQRIA APMVGGMVTA
PLLSMFVVPA IYRLVRRRRR ASAGEAAAVP GKSSIPTPAP SAA
|
|---|
| |