| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1623 |
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| Symbol | |
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| ID | 4787247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1751455 |
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| End bp | 1752855 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640090191 |
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| Product | integrase or site-specific recombinase |
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| Protein accession | YP_001020820 |
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| Protein GI | 124266816 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.262588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTCG TGCGACGCCT GGACGAAGCT GCGCAAGCCA TCCCCTTGCG GGCGCGATCA
CTCACGGATC TCCAGCTCAA GGCCCTGAAG CCGCGGGACA AGGCCTACAA GGTCAGCGAC
CGGGACGGGC TGTACGCCTA CGTGGCGCCG TCGGGGACCG TCAGCCTGCG GTACGACTAC
CGCATCGGCA GGCGCCGCGA GACCCTGACC CTCGGTCGCT ACGACGCCAC CGCTCCGGCG
CGGGTGCCTC GGTCCCTGGA CGTGCTCGAG TACGGCATGG GCCTGTCCCT GGCCGAGGCG
CGACTGCTGC TGACCAAGGC GAAGCGCGCG CTCGAGCAAG GCGTGTCGCC TTCGCGCGCG
AAGGCCGAGC AGAAGGCGGC GGAATCCGAC GCCCTCACGT TCGGCAAGTG GGCCGAGCGC
TACTTCGAGT TCAAGGGTGA TCCCAAGAGC AAGGGCGAGC AGCTGGCCGA CAGTACGCTC
GCCATGCGTC GCTCAACCTA CAAGCGCGCG CTGGAGAAGC CCCTGGGCAA ACTGATGCTG
GAGGAGATCA CACCCAACCG GCTGGCGGCC CTGTGCGACG ACATCAAGGC GCAGCGTGGC
CCGGCGGTGG CGGTGCACGC CCGCGAGATC GTCCTGATGG TCTACCGACA CGTCCAGCGC
AAGGGGATCG AAGTGCCGAA CCCGGCCGAA CGGGTGCAGG CGAGCGCCAT CGCCCGCTTC
GAGCCGCGCG ATCGTGCGCT GTCTCCGAGC GAGCTGCGCC TGTTCCTCGC GGCGCTGGAC
CAGTGCGCGA CGATGCCGAC GCTGCGGCTG GCCGTGCGCT TTGTGCTGCT GACCGGCGTT
CGCAAGGGCG AGTTCATCGG TGCGACGTGG GACGAGATCG TCTTCGACAC CGAGACCTGG
ACGATTCCGT CGCGCCGGAT GAAGGGTGGC AGGGCCCACG TGGTCTATCT CAGCGACCAG
GCGATGGACA TCCTGACGAC GCTGCGGTCG TGCTTCTCGG CAAGCCGCTA CCTTCATCCC
GGCCGGTATG ACAGCGACCT GCCGATCAGC GACGCGACCC TGAACCGGGT CATCGCGATG
GCGATCCGTG GCATTCAGGC GACCGCTCCG GAGTTTCAGC CGTTCACCGT GCACGACCTG
AGGCGGACCT TCAGCACCTC GCTGAACCGG GCCAAGTTCG ACGAGCGCTG GATCGAGATG
GCGCTGGCGC ACGTGCCCCG GAACCGCATC GCCGCGACGT ACAACGTGGC CCGCTATGCG
GCCGAGCGCC GGATCATGAT GCAGGCCTGG GCCGACATGC TCGACCTTTG GGAGAAGGGC
GAGTCGGCCA AGGAAGTGAT CTTGAAGGCG AAGCAGGCAG CCTCCGAGGT GACCGACTTC
GAGTTGGAAG ACGATCTTTG A
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| Protein sequence | MSVVRRLDEA AQAIPLRARS LTDLQLKALK PRDKAYKVSD RDGLYAYVAP SGTVSLRYDY
RIGRRRETLT LGRYDATAPA RVPRSLDVLE YGMGLSLAEA RLLLTKAKRA LEQGVSPSRA
KAEQKAAESD ALTFGKWAER YFEFKGDPKS KGEQLADSTL AMRRSTYKRA LEKPLGKLML
EEITPNRLAA LCDDIKAQRG PAVAVHAREI VLMVYRHVQR KGIEVPNPAE RVQASAIARF
EPRDRALSPS ELRLFLAALD QCATMPTLRL AVRFVLLTGV RKGEFIGATW DEIVFDTETW
TIPSRRMKGG RAHVVYLSDQ AMDILTTLRS CFSASRYLHP GRYDSDLPIS DATLNRVIAM
AIRGIQATAP EFQPFTVHDL RRTFSTSLNR AKFDERWIEM ALAHVPRNRI AATYNVARYA
AERRIMMQAW ADMLDLWEKG ESAKEVILKA KQAASEVTDF ELEDDL
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