Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1621 |
Symbol | |
ID | 4787245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 1748351 |
End bp | 1749607 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640090189 |
Product | tetracycline-efflux transporter |
Protein accession | YP_001020818 |
Protein GI | 124266814 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.651661 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCCC CGCCGCGGGC CCGCGTAGCG GCCATGCCCT TCATCCTGAT CACGGTGCTG ATCGACATGG TGTCGATCGG CCTGATCATC CCGGTGCTGC CGCTGCTGGT CGGCAGCTTC ACCGGCTCGC CCTCCGACAC CGCGTTCTGG TTCGGCGTGG TCACCTTCGC CTTTGCGATC GCCAACTTCT TCGGCTCGCC GATCCTCGGC GCACTGTCCG ACCGCTACGG GCGCCGGCCG GTGCTGCTGA TCGGCTTCTG CGGCCTCGCG CTCAACTTCT TCTTCACGGC GCTGTCGACG GCGCTGTGGA TGCTGGTGGC GGTGCGCCTC GTCGGCGGGG CGATGCAGGC GAATGCCGCG GTCGCCAACG CCTACGTCGC CGACATCACG CCGCCCGAAC AGCGGGCACG GCGCTTCGGA CTGCTGGGCG CGATGTTCGG CCTGGGCTTC ATCCTCGGGC CGGTGCTGGG CGGGCTGCTC GGCGCGATCG ACCTGCACCT GCCGTTCTAC GTGGCAGGCT CACTGGCGCT GGTGAACTGC CTGTACGGCT GGCTGGTGCT GCCCGAGTCG CTGCCTGCCG AGCGCCGGCG TGCGATCGAC TGGAAGCGCG CCAACCCGTT CAGCGCGCTC CGGGACCTGG CCGGCCTGAA GGGCGTGGGC TCGCTGGTGG CGGTGCTGGC GCTGTCGGGG CTGGTGCAGT TCACACTGCA CATCACCTGG GTGCTGTACA CCACCTACAA GTTCGGCTGG GGACCGCTGG AGAACGGCTG GTCGCTGTTC GCGGTCGGGC TGATGTCGGC CCTGGTGCAG GGCATGCTGC TGGGGCGGCT GCTCAGGCGC TTCAGCGCGC AGCGGCTGGC GGTGACCGGC CTGGTGTCGT CGAGCCTGGC CTATGTCTGC TGGGGCCTCG CGACCGAGGG CTGGATGATG TACGTGGTGA TCGCGTGCAA CGTGCTCGGG TTCGGCGTCA CGGCCTGCCT GCAGAGCATC GTGTCGAACG CTGCCGACCC GCGCACCCAG GGGCAGACGA TGGGCGCGGT ATCGTCATTG AACAGCCTGA TGGCCGTGGT GGCGCCGGTG ATCGGCGCAC CGCTGCTCGG CCTGGTGTCG CACCTGCCGC AGGGCGACTG GCGCATCGGC GCCCCCTACT ACTTCTGCGC CGCGCTGCAG GCCACGGCCA TGCTGCTGGC GCTGCGGCAT TTCCGTGCGC AGCGCGGCCA GCGCGCCGCG GCTGTCGCGA CCGAATCTCC CGTCTGA
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Protein sequence | MTSPPRARVA AMPFILITVL IDMVSIGLII PVLPLLVGSF TGSPSDTAFW FGVVTFAFAI ANFFGSPILG ALSDRYGRRP VLLIGFCGLA LNFFFTALST ALWMLVAVRL VGGAMQANAA VANAYVADIT PPEQRARRFG LLGAMFGLGF ILGPVLGGLL GAIDLHLPFY VAGSLALVNC LYGWLVLPES LPAERRRAID WKRANPFSAL RDLAGLKGVG SLVAVLALSG LVQFTLHITW VLYTTYKFGW GPLENGWSLF AVGLMSALVQ GMLLGRLLRR FSAQRLAVTG LVSSSLAYVC WGLATEGWMM YVVIACNVLG FGVTACLQSI VSNAADPRTQ GQTMGAVSSL NSLMAVVAPV IGAPLLGLVS HLPQGDWRIG APYYFCAALQ ATAMLLALRH FRAQRGQRAA AVATESPV
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