| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1609 |
|---|
| Symbol | |
|---|
| ID | 4787233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 1735947 |
|---|
| End bp | 1737029 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 640090177 |
|---|
| Product | thiamine biosynthesis oxidoreductase ThiO, putative |
|---|
| Protein accession | YP_001020806 |
|---|
| Protein GI | 124266802 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.575711 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTTGC TCGATCTCGG CATCGCCGGC GCCGGCCTGC TGGGCCGGCT GCTGGCCTGG
CGGCTGGCGC GCGCCGGCCA CCGCGTCAGC GTGTTCGACC CGGCGCCCGG CCCGCAGCCG
CGCTTCGACG GCCAGGGCGC CGCGGCCTTC AGCGCGGCCG GCATGCTCAG CCCGCTGGCG
GAACTCGACA ACGCCGGCCC GGACATCGCG ACGCTCGGCT GGCGTTCCAT TTCGCTGTGG
CGCGACATCG TCGCCGCACT GCCCGACCCG CCCGCCTTCG GCCAGCTCGG CAGCCTGCTG
CTCGCGCACC GCAACGACTT CGCCACCGCG CAGCGCGTGC TGGCGCGCCT GGCGGCGGTC
CCGGGCGCGA CCGCCTCGCC GCTGTCGGCG CAGCAACTGG CCGACATGGA GCCCGCGCTG
CAGCCGCCCG GCCATGCCTG GCTGCTTCCC GGCGAGGCGC AGATCGAGCC GGTGAAGGCA
ATGTTCTCGC TCTACCACCA TGCCCCCGGC GTGCAGTGGC ACTGGGGCTG CCGCGTCGGC
ACGCTGCACG ACGGCGCGCT GCAGATCGAC GGCGCCGAGT CCGGCTGGCG GCGCTTCGAC
ACGGTGTTCG ACGTGCGCGG CCTCGGCGGG CGGCCGACGC TGCCGCTGCG CGGCGTACGC
GGCGAGACCG TGTGGCTGCA CGCCCCCGGC CACGGCCTGT TGCGGCCGGT GCGGCTGCTG
CACCCGCGGC ACCGCGTCTA CCTGGTGCCG CGACCCGGCG ACATCGTGCT GCTGGGCGCG
ACCGAGATCG AGAGCGAGGA CCGTTCGCCG ATGTCGCTGC GCAGCGCCGT CGAGCTGATG
GCCGCCGCGC ACAGCGTGAT GCCGGCGCTG GCCGAGTCAC GCATCCTGCG GCTCGACCGC
AACCTGCGCC CGGCGCTGCC CGACAACCGG CCGCACATCG ACGTCACGCC GCAGCGGGTG
GCCGTCAACG GCCTGTTCCG TCACGGCTGG CTGCTGGCGC CGGCGCTGGT GGAGGACGCG
CTGGCCGCCT GGGCAAGGCT GCGTGCCGAC GCCGCGCTGC CCGGACCGGA GATCGAGCGA
TGA
|
|---|
| Protein sequence | MPLLDLGIAG AGLLGRLLAW RLARAGHRVS VFDPAPGPQP RFDGQGAAAF SAAGMLSPLA
ELDNAGPDIA TLGWRSISLW RDIVAALPDP PAFGQLGSLL LAHRNDFATA QRVLARLAAV
PGATASPLSA QQLADMEPAL QPPGHAWLLP GEAQIEPVKA MFSLYHHAPG VQWHWGCRVG
TLHDGALQID GAESGWRRFD TVFDVRGLGG RPTLPLRGVR GETVWLHAPG HGLLRPVRLL
HPRHRVYLVP RPGDIVLLGA TEIESEDRSP MSLRSAVELM AAAHSVMPAL AESRILRLDR
NLRPALPDNR PHIDVTPQRV AVNGLFRHGW LLAPALVEDA LAAWARLRAD AALPGPEIER
|
|---|
| |