| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1518 |
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| Symbol | |
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| ID | 4783536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1636468 |
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| End bp | 1638096 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640090085 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_001020715 |
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| Protein GI | 124266711 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.111157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0949052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTGACT TCGCCCGGCT CTACGCCGCT CTGGATGCGA CCACCTCGAC GCACGAGAAG
CTCGAGGCGC TGACGGCCTA CTTCCGGGCC GCTCCCGCCC GCCATGCCGC CTGGGCGGCC
TACTTCCTGG CCGGTGGCAA GCCGCGACAG GCCGTGCCGA CGGCGCTGCT GCGTCAACTG
GCCGCCGAGC GCGCCGGCCT GCCGCCCTGG CTGTTCGACG CCTGCTACGA GGCGGTCGGC
GATCTGGCCG AGACGATCGC GCTCGTGCTG CCGCCGCCGG TACGCGACAG CGCGCTCGGC
CTCGATGACT GGATGCGCGA GCGCATCGGT CCCTTGCGCG GTGCGCCGCC CGAGCAGGTG
CGCACCGCGC TGTTCGATGC GTGGGACGAA CTCGACACCC CCGGCCGCTT CCTGCTCGGC
AAGCTGATCG GCGGCGGCTT TCGCGTCGGC GTCTCGCGGC TGCTGCTCAC GCGCGCGCTG
GCCGCGGTGG CCGGGCTCGA CGCCAAGCTC ATCGCCCAAC GGCTGATGGG CTGGACCGAC
AAAGGCGCCC AGCCGACGGC CGACGCCTAC GCCGCGCTGC TGGCGCCGGA GGCCGCAACC
GGCGACGCCT CGCCCGGCGG CCAGCCCTAC CCGTTCTTCC TCGCGCATCC GCTGCAGGCC
GAGCCGCAGA CGCTCGGCGC GCTCGCCGAT TGGCAGGCCG AATGGAAGTA CGACGGCATC
CGCGCCCAGC TCGTGCGGCG CGGCGGACAA TCCTGGCTCT GGTCGCGCGG CGAGGAGCTG
ATCACCGACC GTTTCCCCGA GCTGGCGAAG CTGTCGCTGC CCGACGGCGC GGTGATCGAC
GGCGAGATCG TCGTCTGGCA GGACAGCCGA CCTGCCCCGT TCGCAGCCCT GCAGCGGCGC
ATCGGCCGCA AGACCCTCGG AGCGCGCCTG CTGCAGGAGT TGCCGGCGGT GCTGATCGCC
TACGACCTGC TGGAGCAGGA GGGTGTCGAC CGGCGCGACG AGCCCCAGCA CCTGCGGCGC
ATGCGCCTCG AGCAACTGAT CTCCGCGACC GCCGACCCCG CGTTGCAGCT CTCGCCCCAG
GTGCAGGCCC CCGACTGGGC TGCACTGGCC GTGCTGCGCG ACACCGCCCG TGAGCGCGGC
GTCGAGGGCC TGATGCTGAA GGCCCGCGAG GCGCGCTATG GCGTCGGTCG CACCAAGGAC
GTCGGCGTGT GGTGGAAGTG GAAAGTCGAC CCCTATGCCG TCGACGCGGT GCTCGTCTAC
GCCCAGGCCG GCCACGGGCG GCGCGCCTCG CTCTACACCG ACTACACCTT CGCGGTGTGG
GACGCCCCGC CGGACGGTGC GCCCGGCGAG CGCCGCCTGG TGCCGTTCGC CAAGGCCTAC
TCCGGCCTGA GCGACGCCGA GATCGCTCGC GTCGACGCGG TGATCCGCAA GACGACGATC
GAGAAGTTCG GGCCGGTGCG CAGCGTGCGG CCGACGCTGG TGTTCGAGAT CGGATTCGAG
GGCATCGCTC TCTCGACGCG CCACAGGGCG GGCGTCGCGG TGCGCTTCCC GCGCATCCTT
CGGACACGTC CCGACAAACC GGTCGAGGAA GCCGACACGC TCGCCACGCT GAAGGGCCTG
CTCACATGA
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| Protein sequence | MRDFARLYAA LDATTSTHEK LEALTAYFRA APARHAAWAA YFLAGGKPRQ AVPTALLRQL
AAERAGLPPW LFDACYEAVG DLAETIALVL PPPVRDSALG LDDWMRERIG PLRGAPPEQV
RTALFDAWDE LDTPGRFLLG KLIGGGFRVG VSRLLLTRAL AAVAGLDAKL IAQRLMGWTD
KGAQPTADAY AALLAPEAAT GDASPGGQPY PFFLAHPLQA EPQTLGALAD WQAEWKYDGI
RAQLVRRGGQ SWLWSRGEEL ITDRFPELAK LSLPDGAVID GEIVVWQDSR PAPFAALQRR
IGRKTLGARL LQELPAVLIA YDLLEQEGVD RRDEPQHLRR MRLEQLISAT ADPALQLSPQ
VQAPDWAALA VLRDTARERG VEGLMLKARE ARYGVGRTKD VGVWWKWKVD PYAVDAVLVY
AQAGHGRRAS LYTDYTFAVW DAPPDGAPGE RRLVPFAKAY SGLSDAEIAR VDAVIRKTTI
EKFGPVRSVR PTLVFEIGFE GIALSTRHRA GVAVRFPRIL RTRPDKPVEE ADTLATLKGL
LT
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