| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1434 |
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| Symbol | |
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| ID | 4783716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1545456 |
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| End bp | 1547606 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640090000 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001020631 |
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| Protein GI | 124266627 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.486546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTACGACC CCCGCGTGGT CGTGCTGTCC ATCGCTGTCG CGATCCTGGC TTCGTTCGTC
ACGCTCGAAC TGGCCAAGCG CGTGCGCAGT GCCGACCGCG TGCTGTCGAT GTGCTGGTGC
ATCGGCGGCG CCCTGGTCAT GGGCAGCGGC ATCTGGTCGA TGCACTTCGT CGGCATGCAC
GCCTTCAGCC TGACGATCCC GCTCGGCTAC CGCGTTTCGA CCACGCTGCT GTCGTGGGGC
GTGGCGCTGC TGGTCTCGCT GGTGGCGCTG GGGATCGCCG GGCGGGAGCA GCTGTCACGC
AGCCTGCACG TGTGGGGGGC GCTGGCGATG GGCGGCGGCA TCATGGCGAT GCACTACATC
GGCATGGCCG CACTGGAGAT GGCGCCGGGC ATCCAGTGGG ATGCGCGCTG GGTGGCGGCA
TCCGGGTTGA TTGCGGTGAC CGCATCCGCT GCCGCTCTGC GGATCTTCTT CTGGATGCGC
CGCCATGCCG GCTGGTCGGC GCTGGCCTAC CAGTGCGCTG CAGCGGTGGT CATGGGACTC
GCGATCAGCG GCGTGCACTA CAGCGGCATG GCAGCTGCAG GCTTCCCCGA GGGCAGCGCC
TGCCTGAGTC TGGACGGCAT CAACGGCGAC TCGCTGGTGC TGATCGTCAG CGTGGCCACC
GTGCTGATGC TGACGATCAC GCTGGTGACC TCGGTCTTCG ACCGGCGCAT GCAGGCCACC
GCGGACGGCC TGTCGCAGTC GTTGCAGCAA GCCAACGAAC GCCTCCAGTC GGCCAACGAC
GAACTGAGCC GCCTGGCCTA CCAGGACGCG TTGACGGGCT TGCCCAACCG CAGCTACTTC
GAGTCGCGCC TGAGCCAGGC GGTCGCCCGT ATCGAACGGC TGCGCGAGCT GCCGACGCCC
TCGGCATCGG CGGGCCTGGC GGTGCTGTTC ATCGACCTCG ACGGCTTCAA GCCGATCAAC
GATTCCTACG GTCATGCCCA TGGCGATCTG GTGCTGCAGG CTGTGGCCGT GCGCCTGCGC
GAGGCGGTGC GCGCGGCCGA CACGCTGGCC CGCCTGGGCG GCGACGAATT CATCGTGCTG
GTCGAGGACG TGAGCTGCGC GGGGGATTGC ATCCACGTCG CGAAGCGCGC CCTGGCCAGC
ATGGGCGAGC CGCTCGTCGT GGTCGGCCAG CCGGTCCACC TGTCGTGCTC GATCGGGGTG
GCGATGTACC CCGACGCCGG CGACGCCAGG CGCCTCATCG CGCACGCCGA TGCGGCGATG
TACGAGGCGA AGCGGGGTGG CGGCAGCACC TACGCGGTCT ACGAGTCGGC GATGAACCAG
GGCGCCGACC AGCAGGTGGC GCTGTACAAC GATCTCGTCA CGGCGATGGA GCGTGGCGAA
CTGCAACTGC ACTACCAACC CAAGGTCGAT CTACGTACCG ACACGATCCG CGGCGTCGAG
GCGTTGATGC GCTGGCGCCA TCCCCAGCGG GGCATGGTGA GCCCGGTGGC CTTCATCCCG
GTGGCCGAGC GCTTCGGCCT GATCAACACG CTCGGCGCCT GGGTCATCGA CGAAGCCTGC
CGGCAGCTGA GCGCCTGGGC CGACGAAGGC CTGCACATGC GCGTGGCGAT CAACCTGTCG
GCGCACCAGC TCATGCAGGC TGACCTGACA GAGCGGGTGG CCGACGCACT GGCGCTGCAC
CAGGTCGAGG CTTCGCAGCT GATCTGCGAG ATCACCGAGT CGGTCGCGAT GGAGGACACC
CGCGTCACCC AGCGCGCGAT CGACGGCCTG CTGGCCATCG GCGTGCAACT GGCGATCGAC
GACTTCGGAA CCGGCTACTC CAGCCTCAGC TACCTGCGCC AGCTGCGGGC CCGGCAGCTG
AAGATCGACC GCAGCTTCAT CCGCGACCTG GCCGGCAGCA GCGACGCCCG CGCGGTGGTC
GATGCGGTGA TCCGGCTGGC CCATGCGCTG GGCATGCAGG TGGTGGCCGA GGGCGTGGAG
GAGACCGACC AGCGCGACCT GCTGGTCGAG ATGGGTTGCG ACCAGCTGCA GGGCTTCCTG
TACGCCAAGC CGATGGCGGC CGACGACATC TCGTACTGGG CGCGCCACCG CGGCGAGCAG
CACGCGGTGC CGTTCTCCGA CTCGACCCTG GTCGACACGA TTCCGGGTTG A
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| Protein sequence | MYDPRVVVLS IAVAILASFV TLELAKRVRS ADRVLSMCWC IGGALVMGSG IWSMHFVGMH
AFSLTIPLGY RVSTTLLSWG VALLVSLVAL GIAGREQLSR SLHVWGALAM GGGIMAMHYI
GMAALEMAPG IQWDARWVAA SGLIAVTASA AALRIFFWMR RHAGWSALAY QCAAAVVMGL
AISGVHYSGM AAAGFPEGSA CLSLDGINGD SLVLIVSVAT VLMLTITLVT SVFDRRMQAT
ADGLSQSLQQ ANERLQSAND ELSRLAYQDA LTGLPNRSYF ESRLSQAVAR IERLRELPTP
SASAGLAVLF IDLDGFKPIN DSYGHAHGDL VLQAVAVRLR EAVRAADTLA RLGGDEFIVL
VEDVSCAGDC IHVAKRALAS MGEPLVVVGQ PVHLSCSIGV AMYPDAGDAR RLIAHADAAM
YEAKRGGGST YAVYESAMNQ GADQQVALYN DLVTAMERGE LQLHYQPKVD LRTDTIRGVE
ALMRWRHPQR GMVSPVAFIP VAERFGLINT LGAWVIDEAC RQLSAWADEG LHMRVAINLS
AHQLMQADLT ERVADALALH QVEASQLICE ITESVAMEDT RVTQRAIDGL LAIGVQLAID
DFGTGYSSLS YLRQLRARQL KIDRSFIRDL AGSSDARAVV DAVIRLAHAL GMQVVAEGVE
ETDQRDLLVE MGCDQLQGFL YAKPMAADDI SYWARHRGEQ HAVPFSDSTL VDTIPG
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