Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1406 |
Symbol | |
ID | 4783919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 1514617 |
End bp | 1515870 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640089972 |
Product | NADH dehydrogenase subunit D |
Protein accession | YP_001020603 |
Protein GI | 124266599 |
COG category | [C] Energy production and conversion |
COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.564759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.621774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGA TCAAGAACTA CACCCTCAAT TTCGGGCCGC AGCATCCGGC GGCCCACGGC GTCCTGCGCC TGATCCTCGA GCTCGACGGC GAGGTGATCC AGCGCGCAGA TCCGCACATC GGCCTGCTGC ACCGCGCGAC CGAGAAGCTC GCGGAGAGCA AGACCTACAT CCAGTCGCTG CCCTACATGG ACCGTCTCGA CTACGTGTCC ATGATGTGCA ACGAGCACGC CTACTGCCTG GCGATCGAGA AGCTGCTCGG CGTCGATGTG CCGGTCCGTG CCCAGTACAT CCGCGTGATG TTCTCCGAGA TCACGCGCAT CCTGAACCAC CTGCTGTGGA TCGGCGCTCA CGGTCTCGAC TGCGGTGCGA TGAACATCCT CATCTACGCC TTCCGCGAGC GCGAGGACCT GTTCGACATG TACGAGGCGG TGTCGGGTGC GCGCATGCAC GCGGCCTACT TCCGTCCGGG CGGCGTGTAC CGCGACCTGC CGGACACCAT GCCGCAATAC CGGGTCTCGA AGATCCGCAA CGCCAAGGCA CTGGCGAAGA TGAACGAGAA CCGGCAGGGC TCGCTGCTGG ACTTCATCGA GGACTTCTGC CGTCGGTTCC CCAAGAACGT CGACGATTAC GAGACGTTGC TCACCGACAA CCGCATCTGG AAGCAGCGCA CCGTGGGCAT CGGCGTCGTG ACGCCGGAGC GCGCACTGAA CCTCGGCTTC ACCGGTCCGA TGCTGCGCGG CTCGGGCATC GCCTGGGACC TGCGCAAGAC GCAGCCCTAC GACGTCTACG ACCGCGTCGA TTTCGACATC CCGGTCGGTG CCGGCGGCGA TTGCTACGAC CGCTACCTGG TGCGCGTCGA GGAGCTGCGC CAGTCGAACC GCATCATCCA GCAGTGCGCG GCCTGGCTGC GCGCTAACCC CGGCCCGGTG ATCACCGACA ACCACAAGGT CGCGGCGCCG GGGCGGGTGG ACATGAAGTC CAACATGGAA GAGCTGATTC ACCACTTCAA GCTCTTCACC GAGGGCTTCC ACGTGCCCGA GGGCGAGGCC TACGCGGCCG TCGAGCACCC GAAGGGCGAG TTCGGCATCT ACCTGGTGAG CGACGGTGCC AACAAGCCCT ACCGACTCAA GATCCGCGCG CCCGGCTTCG CCCACCTCGC GGCGATGGAC GAGATGTCGC GCGGCCACAT GATCGCCGAC GCCGTGGCGG TGATCGGCAC GATGGACATC GTTTTCGGCG AGATTGACCG ATGA
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Protein sequence | MAEIKNYTLN FGPQHPAAHG VLRLILELDG EVIQRADPHI GLLHRATEKL AESKTYIQSL PYMDRLDYVS MMCNEHAYCL AIEKLLGVDV PVRAQYIRVM FSEITRILNH LLWIGAHGLD CGAMNILIYA FREREDLFDM YEAVSGARMH AAYFRPGGVY RDLPDTMPQY RVSKIRNAKA LAKMNENRQG SLLDFIEDFC RRFPKNVDDY ETLLTDNRIW KQRTVGIGVV TPERALNLGF TGPMLRGSGI AWDLRKTQPY DVYDRVDFDI PVGAGGDCYD RYLVRVEELR QSNRIIQQCA AWLRANPGPV ITDNHKVAAP GRVDMKSNME ELIHHFKLFT EGFHVPEGEA YAAVEHPKGE FGIYLVSDGA NKPYRLKIRA PGFAHLAAMD EMSRGHMIAD AVAVIGTMDI VFGEIDR
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