| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1399 |
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| Symbol | |
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| ID | 4783912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1508121 |
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| End bp | 1510376 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640089965 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001020596 |
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| Protein GI | 124266592 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.104449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGT TCAACAAGAT CACCAAGACC TTCCAATGGG GTCAGCACAC CGTCACGCTG
GAAACCGGTG AGATCGCCCG TCAGTCGGGG GGTGCGGTCA TCGTCGACAT GGACGGCACC
GTGGTGCTGG CCACGGTCGT GGCCGCCAAG AACCCGAAGC CGGGCCAGGA CTTCTTTCCG
CTGACCGTCG ACTACATCGA GAAGACCTAT GCCGCCGGCA AGATCCCCGG CAGCTTCTTC
AAGCGTGAAG GCCGCCCGAG CGAACTGGAA ACGCTGACCA GCCGCCTGAT CGACCGTCCG
CTGCGCCCGC TGTTCCCGGA AGGCTTCTAC AACGAGGTGC AGGTCGTCGT GCACGTGCTG
TCGCTGAACC CCGAGGCGTC GGCCGACATC GCCGCGCTGA TCGGCTCCAG CGCCGCGCTG
GCGATCAGCG GCATCCCGTT CAACGGCCCG ATCGGCGCGG CGCGCGTGGG CTACATCAAC
GGCGAGTACG TGCTCAACCC GGGCCCGACG CAGCTGGCCG ATTCCAAGCT CGACCTGATC
GTCGCCGGCA CCGAGGCGGC CGTGCTGATG GTGGAGTCCG AGGCCGACCA GCTGCCCGAA
GACATCATGC TCGGCGGCGT GGTATTCGGT CACGAGCAGG GCAACATCGC CGTGCGCGTG
ATCAACGAGC TGGTGCGCGA GGCCGGCAAG CCCGAGTGGC AGTGGACCCC GCCCGCCAAG
GACGAGGACT TCATCGCCAA GGTCAATGGC CTGGGCGAAG CCAAGTTGCG CGCGGCCTAC
CAGATCCGTT CCAAGCAGGA TCGCACGCAG GCCACCCGCG CGGCCTACGC CGAGGTGCTG
GCCGCACTGG CCGCCGAAGG CGCGGCGGTC GACAAGGTCA AGGTCGAGAA CCTGCTGTTC
GACATCGAAG CCAAGATCGT GCGCAGCCAG ATCCTGGCCG GCGAGCCGCG CATCGACGGC
CGCGACACCC GCACGGTGCG TCCGATCGAG ATCCGCTCCA GCGTGCTGCC GCGCACCCAC
GGCTCGGCGC TGTTTACGCG CGGCGAGACC CAGGCGCTGG TCATCACGAC GCTGGGCACC
GAACGCGACA CGCAGCGCAT CGACGCGCTG GCCGGCGAGT TCGAGGACCG CTTCATGTTC
CACTACAACA TGCCTCCTTT CGCCACCGGC GAGACGGGCC GCGTGGGCTC GCCCAAGCGC
CGCGAGATCG GCCACGGCCG CCTCGCCAAG CGCGCGCTGA TCCCGGTGCT GCCGAAGAAG
GACGAGTTCG CCTACGCGAT CCGCGTCGTC TCGGAGATCA CCGAATCGAA TGGCTCCTCG
TCGATGGCCT CGGTCTGCGG CGGCTGCCTG TCGATGATGG ACGCGGGCGT GCCGCTGAAG
GCCCACGTGG CTGGCATCGC GATGGGCCTG ATCAAGGACG GCAACCGCTT CGCGGTGCTG
ACCGACATCC TGGGCGACGA GGATCACCTC GGCGACATGG ACTTCAAGGT GGCCGGCACG
ACCACCGGCG TGACCGCGCT GCAGATGGAC ATCAAGATCC AGGGCATCAC CAAGGAGATC
ATGCAGGTGG CGCTGGCGCA GGCCAAGGAA GCGCGTCTGC ACATCCTCGG CAAGATGGTC
GAGGCGCTCG GCGGTGCGAA GGAAGAGCTG TCGGTGTTCG CGCCGCGCCT CTACGTGATG
AAGATCAACC CCGAGAAGAT CCGCGACGTG ATCGGCAAGG GCGGCGCCAC CATCCGCGCG
CTGACCGAGG AGACCGGCAC GCAGATCAAC ATCGAGGAAG ACGGCACCAT CACCATTGCG
TCGACCGACG GCGACAAGGC CCAGGCGGCC ATGAAGCGCA TCGAGGAGAT CACGGCCGAG
GCCGAGATCG GCAAGGTCTA CGAGGGCCCG GTCACGAAGA TCCTGGACTT CGGCGCGCTG
GTCAACATCC TGCCCGGCAA GGACGGGCTG CTGCACATCA GCCAGATTGC CCACCAACGC
GTGGAGAAGG TCACCGACTT CCTGACCGAA GGCCAGATCG TCAAGGTCAA GGTCCTGGAG
ACCGACGAGA AGGGGCGCAT CAAGCTGTCG CTGAAGGCGC TGCTCGAGCG GCCCGAGGGC
TATGTCGAGG AAGAGCGCCC GCGCCGTGAA TACGGTGACC GGGGCGATCG CGGTGACCGC
GGCCGTGACC GGGGCGACCG CCCGCCGCGT CGCGAGCGTG GCGACGCGCC GCAGGCCGCG
CCCGAGTCCG ACGTGCCCTC GCCGCAAGCG GAGTGA
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| Protein sequence | MSLFNKITKT FQWGQHTVTL ETGEIARQSG GAVIVDMDGT VVLATVVAAK NPKPGQDFFP
LTVDYIEKTY AAGKIPGSFF KREGRPSELE TLTSRLIDRP LRPLFPEGFY NEVQVVVHVL
SLNPEASADI AALIGSSAAL AISGIPFNGP IGAARVGYIN GEYVLNPGPT QLADSKLDLI
VAGTEAAVLM VESEADQLPE DIMLGGVVFG HEQGNIAVRV INELVREAGK PEWQWTPPAK
DEDFIAKVNG LGEAKLRAAY QIRSKQDRTQ ATRAAYAEVL AALAAEGAAV DKVKVENLLF
DIEAKIVRSQ ILAGEPRIDG RDTRTVRPIE IRSSVLPRTH GSALFTRGET QALVITTLGT
ERDTQRIDAL AGEFEDRFMF HYNMPPFATG ETGRVGSPKR REIGHGRLAK RALIPVLPKK
DEFAYAIRVV SEITESNGSS SMASVCGGCL SMMDAGVPLK AHVAGIAMGL IKDGNRFAVL
TDILGDEDHL GDMDFKVAGT TTGVTALQMD IKIQGITKEI MQVALAQAKE ARLHILGKMV
EALGGAKEEL SVFAPRLYVM KINPEKIRDV IGKGGATIRA LTEETGTQIN IEEDGTITIA
STDGDKAQAA MKRIEEITAE AEIGKVYEGP VTKILDFGAL VNILPGKDGL LHISQIAHQR
VEKVTDFLTE GQIVKVKVLE TDEKGRIKLS LKALLERPEG YVEEERPRRE YGDRGDRGDR
GRDRGDRPPR RERGDAPQAA PESDVPSPQA E
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