Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1354 |
Symbol | |
ID | 4785460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 1458245 |
End bp | 1458913 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640089920 |
Product | rhodopsin-like G-protein |
Protein accession | YP_001020551 |
Protein GI | 124266547 |
COG category | [S] Function unknown |
COG ID | [COG3945] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCCGTAC GCTTTCTTAC ACTGCATCAA CCCCCCGTGC ACGCCAGCTT GACCATCATT CGCCAGGAGC ATCGGGCTCT GTCTGCGATG CTGCGCGCCA TCCACCTGAT GCTGGGAGAG CATCGCCGGC GCGGAACGCT GCCGGACTTC GGGATGTTGC GCGCCATGCT CTTCTACGTC GACGAATTTC CCGAGCGCCT GCACCATGCC AAGGAAAGCC GGCTGCTGTT TCCGATGCTG CGGTCGCGCA GCGCAGAGCG CACCGCCGTG CTGAACCGGC TCGATCAGGA CCATGCCCAG GGCGAGCAGT TCATCCGCAA GCTCGAACAC GAACTGCTGG CCTTCGAGGT GATGGCCGAG ACGCCCCAGG GCGAGGAGCG ACGCGAGCGT TTCGAGCGCT CGATGACGGC CTACATGCAC TTCTACCTGA ACCACATGCG CACGGAGGAG GCGATGGTGC TGCCGATGGC CGAGCGCGTG CTCGGTGATC AGGACTGGAG CGAACTCGAT GCGGCCTTCC TGCAGAACCG CGACCCGCTT GCCGGCGACG AGGGCGATGC GGTGTATGCC GATGTCTTCA GGCGCATCAC CGAAGCGCAA CCGACCCTGC TGGGTCTGGG CTCCGCGCTG GAAGCACTGG CCGGGCGGGC GACGGCGAGG TCCGTCTAG
|
Protein sequence | MAVRFLTLHQ PPVHASLTII RQEHRALSAM LRAIHLMLGE HRRRGTLPDF GMLRAMLFYV DEFPERLHHA KESRLLFPML RSRSAERTAV LNRLDQDHAQ GEQFIRKLEH ELLAFEVMAE TPQGEERRER FERSMTAYMH FYLNHMRTEE AMVLPMAERV LGDQDWSELD AAFLQNRDPL AGDEGDAVYA DVFRRITEAQ PTLLGLGSAL EALAGRATAR SV
|
| |