Gene Mpe_A1354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A1354 
Symbol 
ID4785460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp1458245 
End bp1458913 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content66% 
IMG OID640089920 
Productrhodopsin-like G-protein 
Protein accessionYP_001020551 
Protein GI124266547 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGTAC GCTTTCTTAC ACTGCATCAA CCCCCCGTGC ACGCCAGCTT GACCATCATT 
CGCCAGGAGC ATCGGGCTCT GTCTGCGATG CTGCGCGCCA TCCACCTGAT GCTGGGAGAG
CATCGCCGGC GCGGAACGCT GCCGGACTTC GGGATGTTGC GCGCCATGCT CTTCTACGTC
GACGAATTTC CCGAGCGCCT GCACCATGCC AAGGAAAGCC GGCTGCTGTT TCCGATGCTG
CGGTCGCGCA GCGCAGAGCG CACCGCCGTG CTGAACCGGC TCGATCAGGA CCATGCCCAG
GGCGAGCAGT TCATCCGCAA GCTCGAACAC GAACTGCTGG CCTTCGAGGT GATGGCCGAG
ACGCCCCAGG GCGAGGAGCG ACGCGAGCGT TTCGAGCGCT CGATGACGGC CTACATGCAC
TTCTACCTGA ACCACATGCG CACGGAGGAG GCGATGGTGC TGCCGATGGC CGAGCGCGTG
CTCGGTGATC AGGACTGGAG CGAACTCGAT GCGGCCTTCC TGCAGAACCG CGACCCGCTT
GCCGGCGACG AGGGCGATGC GGTGTATGCC GATGTCTTCA GGCGCATCAC CGAAGCGCAA
CCGACCCTGC TGGGTCTGGG CTCCGCGCTG GAAGCACTGG CCGGGCGGGC GACGGCGAGG
TCCGTCTAG
 
Protein sequence
MAVRFLTLHQ PPVHASLTII RQEHRALSAM LRAIHLMLGE HRRRGTLPDF GMLRAMLFYV 
DEFPERLHHA KESRLLFPML RSRSAERTAV LNRLDQDHAQ GEQFIRKLEH ELLAFEVMAE
TPQGEERRER FERSMTAYMH FYLNHMRTEE AMVLPMAERV LGDQDWSELD AAFLQNRDPL
AGDEGDAVYA DVFRRITEAQ PTLLGLGSAL EALAGRATAR SV