Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1293 |
Symbol | clpX |
ID | 4785015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 1398405 |
End bp | 1399676 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640089859 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_001020490 |
Protein GI | 124266486 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0569317 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGAGA AAAAAGGCTC CTCCAGCGAA AAAGTGCTGT ATTGCTCGTT CTGCGGGAAG AGTCAGCACG AGGTGAAGAA GCTCATCGCC GGCCCGTCGG TGTTCATCTG CGACGAGTGC ATCGAACTCT GCAACGACAT CATCCGTGAC GAAGTGCCCG CGGAAAGCGG GGACGCGAAG GCAGCCAAGA GCGATCTGCC GGTACCCGGC GAGATCAAGG CCAGTCTGGA TCAGTACGTG ATCGGACAGG AGCCGGCCAA GCGCACGCTG GCCGTCGCGG TCTACAACCA CTACAAGCGC CTCAAGCATG TGCAGGGCGT GGGCAAGAAG GAGGACGTGG AGCTCGCCAA GAGCAACATC CTGCTGATCG GCCCCACCGG TTCCGGCAAG ACACTGCTGG CGCAGACGCT GGCGCGGCTG CTCAACGTGC CGTTCGTGAT TGCCGATGCC ACCACGCTGA CCGAGGCCGG ATACGTGGGC GAGGATGTCG AGAACATCAT CCAGAAGCTG CTGCAGAACT GCAACTACGA GGTCGAGCGC GCGCAGCGCG GCATTGTCTA TATCGACGAG ATCGACAAGA TCTCGCGCAA GGCCGACAAC CCCTCCATCA CGCGTGACGT GTCGGGCGAG GGTGTGCAGC AGGCGTTGCT CAAGCTCGTC GAGGGCACGA TGGCCAGCGT GCCGCCGCAG GGCGGCCGCA AGCACCCGAA CCAGGACTTC CTGCAGATCG ACACCACCAA CATCCTGTTC ATCTGCGGCG GCGCCTTCGA CGGCCTCGAG AAGGTGATCC AGAACCGCTC CGAGAAGTCG GGGATCGGCT TCGGCGCCAG CGTGCAGAGC AAGACCGAAC GCAAGGTCAG CGAAGTGTTC CGCGAAGTCG AGCCCGAGGA CCTGATCAAG TTCGGTTTGA TCCCTGAGCT GGTCGGCCGC CTGCCGGTGG TCGCCACGCT GGGCGAGCTG ACCGAGGACG CGATGGTGCA GATCCTCACC GAGCCGAAGA ACGCGCTGGT CAAGCAGTAC CAGAAGCTGT TCGCGATGGA CGGCGTCGAG CTCGAGATCC GGCCGTCGGC GCTGACCGCC ATCGCCCAGA AGGCGCTGGC CCGCAAGACC GGAGCGCGCG GGCTGCGCTC GATCATGGAG CACTCGCTGA TGGACACCAT GTTCGATCTG CCCACCATGG ATGGCGTCCA GAAGGTCGTG CTCGACGAGC ACACGATCGA AGAACACACC AAGCCGCTGC TGGTCTACCG CGAACAGAAG GCCAGCGCCT GA
|
Protein sequence | MPEKKGSSSE KVLYCSFCGK SQHEVKKLIA GPSVFICDEC IELCNDIIRD EVPAESGDAK AAKSDLPVPG EIKASLDQYV IGQEPAKRTL AVAVYNHYKR LKHVQGVGKK EDVELAKSNI LLIGPTGSGK TLLAQTLARL LNVPFVIADA TTLTEAGYVG EDVENIIQKL LQNCNYEVER AQRGIVYIDE IDKISRKADN PSITRDVSGE GVQQALLKLV EGTMASVPPQ GGRKHPNQDF LQIDTTNILF ICGGAFDGLE KVIQNRSEKS GIGFGASVQS KTERKVSEVF REVEPEDLIK FGLIPELVGR LPVVATLGEL TEDAMVQILT EPKNALVKQY QKLFAMDGVE LEIRPSALTA IAQKALARKT GARGLRSIME HSLMDTMFDL PTMDGVQKVV LDEHTIEEHT KPLLVYREQK ASA
|
| |