Gene Mpe_A1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A1293 
SymbolclpX 
ID4785015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp1398405 
End bp1399676 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content63% 
IMG OID640089859 
ProductATP-dependent protease ATP-binding subunit ClpX 
Protein accessionYP_001020490 
Protein GI124266486 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1219] ATP-dependent protease Clp, ATPase subunit 
TIGRFAM ID[TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0569317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAGA AAAAAGGCTC CTCCAGCGAA AAAGTGCTGT ATTGCTCGTT CTGCGGGAAG 
AGTCAGCACG AGGTGAAGAA GCTCATCGCC GGCCCGTCGG TGTTCATCTG CGACGAGTGC
ATCGAACTCT GCAACGACAT CATCCGTGAC GAAGTGCCCG CGGAAAGCGG GGACGCGAAG
GCAGCCAAGA GCGATCTGCC GGTACCCGGC GAGATCAAGG CCAGTCTGGA TCAGTACGTG
ATCGGACAGG AGCCGGCCAA GCGCACGCTG GCCGTCGCGG TCTACAACCA CTACAAGCGC
CTCAAGCATG TGCAGGGCGT GGGCAAGAAG GAGGACGTGG AGCTCGCCAA GAGCAACATC
CTGCTGATCG GCCCCACCGG TTCCGGCAAG ACACTGCTGG CGCAGACGCT GGCGCGGCTG
CTCAACGTGC CGTTCGTGAT TGCCGATGCC ACCACGCTGA CCGAGGCCGG ATACGTGGGC
GAGGATGTCG AGAACATCAT CCAGAAGCTG CTGCAGAACT GCAACTACGA GGTCGAGCGC
GCGCAGCGCG GCATTGTCTA TATCGACGAG ATCGACAAGA TCTCGCGCAA GGCCGACAAC
CCCTCCATCA CGCGTGACGT GTCGGGCGAG GGTGTGCAGC AGGCGTTGCT CAAGCTCGTC
GAGGGCACGA TGGCCAGCGT GCCGCCGCAG GGCGGCCGCA AGCACCCGAA CCAGGACTTC
CTGCAGATCG ACACCACCAA CATCCTGTTC ATCTGCGGCG GCGCCTTCGA CGGCCTCGAG
AAGGTGATCC AGAACCGCTC CGAGAAGTCG GGGATCGGCT TCGGCGCCAG CGTGCAGAGC
AAGACCGAAC GCAAGGTCAG CGAAGTGTTC CGCGAAGTCG AGCCCGAGGA CCTGATCAAG
TTCGGTTTGA TCCCTGAGCT GGTCGGCCGC CTGCCGGTGG TCGCCACGCT GGGCGAGCTG
ACCGAGGACG CGATGGTGCA GATCCTCACC GAGCCGAAGA ACGCGCTGGT CAAGCAGTAC
CAGAAGCTGT TCGCGATGGA CGGCGTCGAG CTCGAGATCC GGCCGTCGGC GCTGACCGCC
ATCGCCCAGA AGGCGCTGGC CCGCAAGACC GGAGCGCGCG GGCTGCGCTC GATCATGGAG
CACTCGCTGA TGGACACCAT GTTCGATCTG CCCACCATGG ATGGCGTCCA GAAGGTCGTG
CTCGACGAGC ACACGATCGA AGAACACACC AAGCCGCTGC TGGTCTACCG CGAACAGAAG
GCCAGCGCCT GA
 
Protein sequence
MPEKKGSSSE KVLYCSFCGK SQHEVKKLIA GPSVFICDEC IELCNDIIRD EVPAESGDAK 
AAKSDLPVPG EIKASLDQYV IGQEPAKRTL AVAVYNHYKR LKHVQGVGKK EDVELAKSNI
LLIGPTGSGK TLLAQTLARL LNVPFVIADA TTLTEAGYVG EDVENIIQKL LQNCNYEVER
AQRGIVYIDE IDKISRKADN PSITRDVSGE GVQQALLKLV EGTMASVPPQ GGRKHPNQDF
LQIDTTNILF ICGGAFDGLE KVIQNRSEKS GIGFGASVQS KTERKVSEVF REVEPEDLIK
FGLIPELVGR LPVVATLGEL TEDAMVQILT EPKNALVKQY QKLFAMDGVE LEIRPSALTA
IAQKALARKT GARGLRSIME HSLMDTMFDL PTMDGVQKVV LDEHTIEEHT KPLLVYREQK
ASA