| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1285 |
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| Symbol | |
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| ID | 4785007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1385055 |
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| End bp | 1388315 |
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| Gene Length | 3261 bp |
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| Protein Length | 1086 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640089851 |
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| Product | DNA helicase/exodeoxyribonuclease V, subunit A |
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| Protein accession | YP_001020482 |
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| Protein GI | 124266478 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR02784] double-strand break repair helicase AddA, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.196421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.100578 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCGG CGGCGTTCGC CTACCGCATC GATGGCGCGC TGGTGGCGCC GGCGGCGTTC
TACCGCGTGG CCTGCGACCC GCGCCGCAGC GTCGTCGTCG AAGCCTGTGC CGGCGCCGGC
AAGACGTGGA TGCTGGTGTC GCGCATCCTG CGTGCGCTGC TCGATGGCGC GGCGCCGCAG
GAGATCCTGG CCATCACCTT CACCCGCAAG GCTGCGGGCG AGATGCGCGA GCGCCTGCAG
GGCTGGCTGC ACGAGTTCGC GCTGTGCGAC GACGCGCAGC GCGAGCAGGC GCTGGTCGAT
CGCGGCTGCA CGCGGCAGGA GGCCGGCGTG CTCGTGCCCC GGCTGGCCGC GCTGTACTCA
GAGTTGCTGT CCGGCGGACG GCTGGTCGAG ATACGCACCT TCCATGGCTG GTTCAGCCAG
TTGTTGCGCG CCGCGCCGCT GGCGCTGCTG GAGCCGCTGG GCCTGCAGTC CGAGGTCGAC
CTGCTCGAGG ACCGCAGCGA CCTGCAGCCG CACTACTGGC GGCGTTTCCT GTCGGCCGTA
TCGGCCGATG CCGCCCTGCG CGAGGACTTC GCGGCACTCG TGCACGATCG CGGGCGCCAC
GTGGCGCAGC AGTGGCTCGA GGCTGCGCTC GACCAGCGCG TCGAGATCGA ACGGACCGAT
GCCGCCGGCG TGCTGGAAAC CAGCGTGCCA GCGGCCGCAG CGCTGTGGCC GCAGTTCGAC
GGACTGGCCC ATCCCGCCGA CTGGCTGGCG CAGCCGGACA TCCGGAGCGC GCTGTCGACT
CTGGCGGTGG CGCTGGGGGC GGCCGGGGGC AAGAAGTCGC GAGATGCGGG CAGCGCACTC
GAGCAGGCGC TGGCCGGCAT CGAAGCCGAT CCGTCGGCGG CCTTCGACGC CGCCTGGCAG
GCCTTGTTCA CCAAGACCGG CGAACTGCGC AAGCAGATCG ACGCACCGGG CCTGAACGAG
GCGGCCGACG TGCTGCGGCG CATTGCCGAG GCCATGGACC AGCAGGCGGC GCACCGTGCG
CATGCGCGCA TGGTCCGGCT GTCTCGCGTA TTGCTCGCCA GCTACCGCCA GCTCAAGCGC
GACCGCGGCC TCGCCGACAT GGCCGACCTC GAGGCCTGCG CCGAGCACCT GCTGGCCGAT
GCCGAACTGT CGGGCTGGGT TCAGGAGCGG CTGGATGCGC GCGTGCGTCA CCTGCTGATC
GACGAGTTCC AGGACACCAG CCCGCTGCAG TGGCGCACGC TCGACGCCTG GCTCAGCGGC
TACGCCGGGG CCGGCGGCGG CAGCAGCGGA CAGCGGCCCC TGTCGGTCTT CATCGTCGGC
GATCCGAAGC AGAGCATCTA CCGCTTCCGT CGGGCCGACC CGCGCGTCTT TGCGCAGGCG
CGCGACTTCG TCGTCACCGC GCTGGACGGT GCCCACCTGG CCTGCGACCA CACGCGCCGC
AACGCGCCCC GGGTGCTGGC CGTACTGAAT GCGGTGTTCG CGCACGCGCA GGCTGGTGGC
CGGTTCGACG ACTTCCGCCC GCACACCACC GACGTGAGCG AGCCGCCCGG TGCGGTGTGG
TTGCTGCCGG CGGTGCCCCG GCCGGAGAAG GGCGGCCCGG TGGTTGCCGC CGGCGGTTGG
CGCGACAGCC TCACCACACC GCGCACCGAG CCTGAAGAGG TGCTGCGGCG GATCGAGGCG
GAGCAGGTTG CGGTCGGCAT CACCGCCCTG CTGGCCGAAG GGGGGCTGGC CCCGGGCGAC
ATCCAGGTGC TGTGTCGCAA GCGGGCCCCG TTGGCACTGG TGGCCCAGGC GCTGCGTGAA
CGTGGCGTTC CCCACGCCAC GCCCGAGCAG CGCGAGCTGA TGGCGGCGCC CGAAGTGCGC
GACCTGGTCG CGCTGCTCGA TGCGCTGGCG TCACCGTCGC ACGACCTGTC GTTCGCGCAG
GCCCTGAAGA GTCCGGTGTT CGGCGCGAGC GATGACGACC TGGTGGCGCT CGCACGGGCG
GCGCGGGCTG AGCGGCTTGC CTGGAGCGAG GTGCTGCTGC GTGGCGCAGG CGCGGGCAGG
GCGGCCCTCG ATCGGGCCCG CGCGCTGTGG CCCGGCTGGC TGGCGGCCGC CGCGGCACTG
CCGCCGCACG ATCTGCTCGA TCGCATCGTC GACGAGGGCG AGGTGCGCGA GCGCTATGCC
GCTGTGGTAC CGCCTGCGGG GCGCTTGCTG GCGCTTGCGG CCATCGATGC GCTGCTGGCG
CAGTCGCTGC TGCTCGACGG TGCGCGCCAT GCCACGCCCT ACAACTTCGT GCGTGCGCTC
CGGCGCCGGC GCGTGCTGCT GCCGCCGCAG AGCGCGGCCG ACGCGGTGCA GTTGCTGACC
ATCCATGGCG CCAAGGGCCT GGAGGCGCGC GCGGTGTTCG TGATCGACAC CATGCCGGAG
GCGCCGAAGG CGGAGACCGC GACCCTGCTG ATCGACTGGC CGGCCGATGC GGCGCACCCC
CATTGCTGCG CCTTCGTCGC CAGTGAGTCG CGTTGCCCGC CGTCGCTGCG CGCCCTGATG
GCGGCCGAGC AGGAAGGGCG GGCGCGCGAG GAGCTCAATG CGCTCTACGT GGCGATGACC
CGGGCCCGAG AGCGGCTCGT CTTCAGCGCG ACAACCCCGC ACCGCGCGGC GCCAGGGCCG
AGCGCGTGGC AGCGACTCGC TGAAGCGGGG GCGGATGCCG TCCCACCGTC AGCCGATGCC
GGTGGCACGG CAGGGTCCGC CGGGTCGGCC GAGAGCCCGG TGGTGCTGCT TGCGCTGCCG
CGCGTCCGTC TCGCCGCCGA GCCCTCCGAC CCGGTGGCGG CCGACGCCGA CACCGAAGCT
GCGCAACTCG GCCGTGCGGT GCATCGCGTG CTCGAATGGC TGCCGGCCGA CGCCGCGCTC
GATGCGGCCG CAGCGGCGGC GGCCATCGAG TTCGCGTTGC CGCCCGACGC CGCGCCTCGC
GTGGCCGCGC TGGTGCGGGC GGTGCTGGGC AGTGCGGCCT GTGCACGCTT CTTCGACCCG
GAGGCGCTGC ACTGGTCGGG CAACGAGGTG GCGATCGCAT GGCGCGGCGC CGCGTTGCGC
ATCGATCGGC TGGTGGCATT GCACACGCCC GCAGGCCCGG AGTGGTGGGT GCTCGACTAC
AAGCTGCAGC ACGCACCGCA GGCGATCGAG GCCTACCGGG AACAACTGGC CGGCTACCGC
GAGGCCGTGC AGTCTCTGCA GGGGGGCGAG AGCGTGCGTG CGGCCTTCAT CACCGCGGCC
GGCGAGGTGA TCGAACTCTA G
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| Protein sequence | MTSAAFAYRI DGALVAPAAF YRVACDPRRS VVVEACAGAG KTWMLVSRIL RALLDGAAPQ
EILAITFTRK AAGEMRERLQ GWLHEFALCD DAQREQALVD RGCTRQEAGV LVPRLAALYS
ELLSGGRLVE IRTFHGWFSQ LLRAAPLALL EPLGLQSEVD LLEDRSDLQP HYWRRFLSAV
SADAALREDF AALVHDRGRH VAQQWLEAAL DQRVEIERTD AAGVLETSVP AAAALWPQFD
GLAHPADWLA QPDIRSALST LAVALGAAGG KKSRDAGSAL EQALAGIEAD PSAAFDAAWQ
ALFTKTGELR KQIDAPGLNE AADVLRRIAE AMDQQAAHRA HARMVRLSRV LLASYRQLKR
DRGLADMADL EACAEHLLAD AELSGWVQER LDARVRHLLI DEFQDTSPLQ WRTLDAWLSG
YAGAGGGSSG QRPLSVFIVG DPKQSIYRFR RADPRVFAQA RDFVVTALDG AHLACDHTRR
NAPRVLAVLN AVFAHAQAGG RFDDFRPHTT DVSEPPGAVW LLPAVPRPEK GGPVVAAGGW
RDSLTTPRTE PEEVLRRIEA EQVAVGITAL LAEGGLAPGD IQVLCRKRAP LALVAQALRE
RGVPHATPEQ RELMAAPEVR DLVALLDALA SPSHDLSFAQ ALKSPVFGAS DDDLVALARA
ARAERLAWSE VLLRGAGAGR AALDRARALW PGWLAAAAAL PPHDLLDRIV DEGEVRERYA
AVVPPAGRLL ALAAIDALLA QSLLLDGARH ATPYNFVRAL RRRRVLLPPQ SAADAVQLLT
IHGAKGLEAR AVFVIDTMPE APKAETATLL IDWPADAAHP HCCAFVASES RCPPSLRALM
AAEQEGRARE ELNALYVAMT RARERLVFSA TTPHRAAPGP SAWQRLAEAG ADAVPPSADA
GGTAGSAGSA ESPVVLLALP RVRLAAEPSD PVAADADTEA AQLGRAVHRV LEWLPADAAL
DAAAAAAAIE FALPPDAAPR VAALVRAVLG SAACARFFDP EALHWSGNEV AIAWRGAALR
IDRLVALHTP AGPEWWVLDY KLQHAPQAIE AYREQLAGYR EAVQSLQGGE SVRAAFITAA
GEVIEL
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