Gene Mpe_A1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A1278 
Symbol 
ID4785000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp1375532 
End bp1376914 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content71% 
IMG OID640089844 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001020475 
Protein GI124266471 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR02966] phosphate regulon sensor kinase PhoR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00211916 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.292462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCTGGC TGTTTCCGCG CCTCTTCTCC TGCCTTGTCG CGCTGCTGCT GGGCGGGACG 
GTCGGCTATG TGACCGGCGC AGCGGTGCGC GCGCCGATCC TGGGTGCCTT GCTGGGTGGC
GCGCTGGCGA TCGGCTTGAT CGCCGCCGTG GACACCCTGC GCGGCGCGCG GCTGATCGCC
TGGTTGCGCG GCTCGCAGGA TACCGACGCG CCGCGTGACG CCGGCTTCTG GGGCGAGATC
GCCTACCGCG TCGAGCGCGG CATCCGGGCG CGTGAGCGCA GCACGGTGCA GGAGAAGGCG
CGGCTCGCAC AGTTTCTCGA CGCGATCGAG GCCTCGCCGA ACGGCGTGTT GATGCTCGAC
GTCAACGGGC AGATCGACTG GTGCAATTCG GTGGCGGCCT CGCACTTCGG TCTCGACCCG
CGGCGCGACC GGCTGCAGCG CATCACCAAC CTCGTGCGCG CGCCGGCCTT CGTGGCCTAC
CTGCAGGCCG GCGTCTACCG GGAGGCGGTG GTCTTCCCCA GCCCGAACGG GCTGGGCACG
CTGTCGGTCC TGGTGCGCGA CTATGGTGAA GGCATGAAGC TGGTGCTGTC GCAGGACATC
ACCGAGCGCG AGCGGGCCGA CGCCATGCGC CGTGATTTCG TGGCCAACGT GTCGCACGAG
ATCCGCACGC CGCTGACGGT GCTTTCGGGA TTCATCGAGA CCATGAGCAC GCTGCCGCTG
ACCGAGGTGG AGTCGCGTCG CGTGCTCGTG TTGATGAGCC AGCAGGCTCA GCGCATGCAG
ACGCTGGTGA GCGACCTGCT GACGCTCGCG CAGCTCGAGG GCAGCCCGCG TCCGGCCGCC
GACCGCTGGA TCGCGGTGTC GCGGCTGCTG CAGCTGGTCG AGGCCGACGC CCGCACGCTG
TCGCAGGGCC GGCACACGCT GACGCTGGCT GGCGACGACA GTGCACAGAT CGCCGGAGCC
GAAACGGAGC TGCTGAGCGC GCTCACCAAC CTGGCGAACA ACGCCGTGCG CTACACACCC
GAAGGCGGAC GCATCGACAT CAGCTGGCGC CGGCTGGCCG ACGGCAGCGG CGAGTTCGCC
GTCAGGGATA CCGGCCTGGG CATCGAGCGC GAGCACCTTC CGCGCTTGAC CGAGCGCTTC
TACCGGGTCG ATGGCAGCCG CTCGCGCGAC ACCGGCGGCA CCGGCCTGGG ACTGTCGATC
GTGAAGCACG TCGCGCAGCG CCACGGCGGC GAACTCGACG TCCAGAGCGA GCCCGGCAAG
GGCTCGACCT TCCGTCTCGT CTTTCCGGCC GCGCGCCTGC GCTGCGTGGC GGCGCCGACG
ACACCTCAGC CGGCCAGCGA CCCGGGGGTC CCCGTGGGCG GCCTCACGGC CGACACGCGC
TGA
 
Protein sequence
MTWLFPRLFS CLVALLLGGT VGYVTGAAVR APILGALLGG ALAIGLIAAV DTLRGARLIA 
WLRGSQDTDA PRDAGFWGEI AYRVERGIRA RERSTVQEKA RLAQFLDAIE ASPNGVLMLD
VNGQIDWCNS VAASHFGLDP RRDRLQRITN LVRAPAFVAY LQAGVYREAV VFPSPNGLGT
LSVLVRDYGE GMKLVLSQDI TERERADAMR RDFVANVSHE IRTPLTVLSG FIETMSTLPL
TEVESRRVLV LMSQQAQRMQ TLVSDLLTLA QLEGSPRPAA DRWIAVSRLL QLVEADARTL
SQGRHTLTLA GDDSAQIAGA ETELLSALTN LANNAVRYTP EGGRIDISWR RLADGSGEFA
VRDTGLGIER EHLPRLTERF YRVDGSRSRD TGGTGLGLSI VKHVAQRHGG ELDVQSEPGK
GSTFRLVFPA ARLRCVAAPT TPQPASDPGV PVGGLTADTR