| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1148 |
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| Symbol | |
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| ID | 4785723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1227099 |
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| End bp | 1229912 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640089711 |
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| Product | DNA-directed DNA polymerase |
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| Protein accession | YP_001020344 |
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| Protein GI | 124266340 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.725762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.433626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTC ACGACGATTC CTGCCTGTTG CTGGTGGACG GTTCCAGCTA CCTCTACCGC
GCCTACCACG CGCTGCCTGA CCTGCGCAAT CCGGCCGGCG AGCCGACCGG CGCGGTGCGC
GGCATGGTGG CCATGCTGAA GAAGCTGCGC GAGGAGTTCC CGTCGGCGCA CGCGGCCTGC
GTGTTCGACG CCAAGGGCAA GACCTTCCGC GACGACTGGT ACCCGGAGTA CAAGGCGAAC
CGCGCCTCGA TGCCGGAGGA TCTGGCGAGG CAGATCGCGC CGATCCACGC TGTGGTGACG
CTGCTGGGCT GGCCGGTGCT CGAGATCCCC GGCATCGAGG CCGACGACGT GATCGGCACG
CTGGCGCGGG CGGCCGCCGC GCGCGGCCAG CGGGTCATCG TCTCGACAGG CGACAAGGAC
TTGGCGCAGC TCGTCGACGC GCACGTGACG CTGATCAACA CGATGAGCGG CGAGCGGCTC
GACGTGGCCG GCGTGACCGA GAAGTTCGGT GTGCCGCCCG AGCGCATCGT CGACTACCTG
ACGCTGGTCG GCGACGCGGT CGACAACGTG CCGGGAGTCG AGAAGGTGGG GCCGAAGACC
GCCGCCAAGT GGATCGCGGA GCACGGCTCG CTGGACGGCG TGATGGCCGC GGCCGACGCC
ATCAAGGGCG TTGCCGGCGA GAACCTGCGC AAGGCGCTGG ATTGGCTGCC GCTGGGTCGC
CGGCTGGTGA CCGTGAAGAC CGACTGTGAT CTGTCGGAGG CACTGCCGGG CTGGAACGGC
ACGGCCGCCT GGGACACGCT GACCTGGCGC GAGACCGACC GCGCGGCCCT GTTGGCCTTC
TACACGCACA ACGACTTCCG CGCGTGGCGC AATGAGCTCG AGTCGGCCCG TGCCGCCGCC
GCGCCGGCCC CGCAAGTGGC GGCGGCGGAG GCCGGGGAAG GGCAGAGCGC GCTGTTCGCC
GACCCGGCGG GTACCGGGCC GGCCGATGGT GGCGTCGCGC CTGCGGTCGA CAAGCGCTAC
GAGACCGTGC TGGCGCGCGA GGCCTTCGAG GCGTGGCGCG CGCGCATCGA GGCGGCCGAC
CTGGTGGCTC TGGACACGGA GACCGACTCG CTCGACGGCA TGCGGGCACG CATCGTCGGC
CTGAGCTTCA GCGTGCAGCC CTACGAGGCC TGCTACATCC CGCTCGCCCA CACCTACCCG
GGCGCGCCCG ACCAGCTGCC GCTCGATGAG GTGCTGGCGG CGCTGAAGTC CTGGCTCGAG
GACGGCTCGC GCGCCAAGCT CGGCCAGAAC GTCAAGTACG ACACCCATGT GTTCGCCAAC
CATGGCATCG CGGTGCGTGG CTATGTGCAT GACACCCTGC TGCAGAGCTA CGTGCTGGAG
GCGCACAAGC CGCACAGCCT GGAAAGCCTC GCCAGCCGCC ACCTCGACCG CAAGGGCCTG
AGCTACGAGG ACGTGGCCGG CAAGGGCGCG CAGCAGATCC CGTTCGCGCA GGTCGAGCTG
ACGCGCGCCA CCGAGTATTC GGGCGAGGAC AGCGACATGA CGCTGGACGT GCACAGGGTC
TTGTGGCCGC AGCTCGAGGC CGCGCCGCGC CTGCGCGAGG TCTACGAGCG CATCGAGATG
CCGACCTCGG TGATCCTCGG CCGCATCGAG CGTCACGGCG TGCTGATCGA CAGCGCGCTG
CTCGCGCGCC AGAGCGCCGA TCTGGCGCAG CGCATGGTGG CACTGGAGCA GGAGGCGCAT
GCGCTGGCCG GCCAGCCCTT CAACCTGGGC AGCCCCAAGC AGATCGGCGA GATCCTGTTC
AACAAGCTGG GCATCCCGGC GAAGAAGAAG ACCGCCAGCG GCGCGCCGAG CACCGACGAG
GAGGTCCTGG CCGAGCTGGC CGCCGACTAC CCACTGCCGG CCAAGCTGCT GGAGCACCGC
TCGCTCGCCA AGCTCAAGGG CACCTACACG GACAAGCTGC CGCTGATGGT GAACGCGGCC
ACCGGCCGCG TGCACACCAA CTACGCGCAG GCAGTCGCGG TGACCGGCCG GCTGGCCAGC
AACGACCCCA ACCTGCAGAA CATCCCGATC CGCACGCCCG AGGGCCGGCG CGTGCGCGAG
GCCTTCATCG CGCCGCCCGG CCACGTGATC CTGAGCGCCG ACTACTCGCA GATCGAGCTG
CGCATCATGG CCCACATCTC CGAGGATCCG GGCCTGCTGA AGGCCTTTGC CGAGGGCCTG
GACGTGCACC GCGCCACCGC GAGCGAGGTG TTCAACGTGC CGGTGGCCGA GGTCAGCAGC
GAGCAGCGGC GCTATGCCAA GGTCATCAAC TTCGGGCTGA TCTACGGCAT GGGCGCCTTC
GGTCTGGCGA GCAACCTCGG CATCGAGCAG AAGGCCGCCA AGGACTACAT CGATCGCTAC
TTCGCGCGCT TCGCCGGCGT GAAGCGCTAC ATGGACGAGA CCCGCGCGCG GGCCAAGGAG
CTGGGCTACG TGGAGACCTT GTTCGGGCGC CGCATCTACC TGCCCGAGAT CAACGGCGGC
AACGGTCCGC GCCGCACCGG CGCCGAGCGC CAGGCGATCA ACGCGCCGAT GCAGGGCACC
GCGGCCGACC TGATCAAGCT CGCGATGATC GCGGTGCAGG CGGCGCTCGA TGCCCAGCAG
CGCGCCACGT GCATGGTGAT GCAGGTGCAC GACGAGCTGG TGTTCGAAGT GCCCGAGGCC
GAGCTCGACT GGGCCCGGAC CGCCGTGCCG GAACTGATGG CCGGCGTGGC CGAGCTGAAG
GTGCCGCTGC TGGCCGAGGT GGGCGTGGGC GCGAACTGGG ACCTCGCCCA CTGA
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| Protein sequence | MSAHDDSCLL LVDGSSYLYR AYHALPDLRN PAGEPTGAVR GMVAMLKKLR EEFPSAHAAC
VFDAKGKTFR DDWYPEYKAN RASMPEDLAR QIAPIHAVVT LLGWPVLEIP GIEADDVIGT
LARAAAARGQ RVIVSTGDKD LAQLVDAHVT LINTMSGERL DVAGVTEKFG VPPERIVDYL
TLVGDAVDNV PGVEKVGPKT AAKWIAEHGS LDGVMAAADA IKGVAGENLR KALDWLPLGR
RLVTVKTDCD LSEALPGWNG TAAWDTLTWR ETDRAALLAF YTHNDFRAWR NELESARAAA
APAPQVAAAE AGEGQSALFA DPAGTGPADG GVAPAVDKRY ETVLAREAFE AWRARIEAAD
LVALDTETDS LDGMRARIVG LSFSVQPYEA CYIPLAHTYP GAPDQLPLDE VLAALKSWLE
DGSRAKLGQN VKYDTHVFAN HGIAVRGYVH DTLLQSYVLE AHKPHSLESL ASRHLDRKGL
SYEDVAGKGA QQIPFAQVEL TRATEYSGED SDMTLDVHRV LWPQLEAAPR LREVYERIEM
PTSVILGRIE RHGVLIDSAL LARQSADLAQ RMVALEQEAH ALAGQPFNLG SPKQIGEILF
NKLGIPAKKK TASGAPSTDE EVLAELAADY PLPAKLLEHR SLAKLKGTYT DKLPLMVNAA
TGRVHTNYAQ AVAVTGRLAS NDPNLQNIPI RTPEGRRVRE AFIAPPGHVI LSADYSQIEL
RIMAHISEDP GLLKAFAEGL DVHRATASEV FNVPVAEVSS EQRRYAKVIN FGLIYGMGAF
GLASNLGIEQ KAAKDYIDRY FARFAGVKRY MDETRARAKE LGYVETLFGR RIYLPEINGG
NGPRRTGAER QAINAPMQGT AADLIKLAMI AVQAALDAQQ RATCMVMQVH DELVFEVPEA
ELDWARTAVP ELMAGVAELK VPLLAEVGVG ANWDLAH
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