| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1142 |
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| Symbol | |
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| ID | 4785717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1218948 |
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| End bp | 1221314 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640089705 |
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| Product | ATP-dependent DNA helicase UvrD |
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| Protein accession | YP_001020338 |
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| Protein GI | 124266334 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.140222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTGT CAGTTGAAAA CGATCGTGCG CCTCCGGGCG AAGCCGCTGG TCTGCTGCGC
CACCTGAACC CCGAGCAGCT CGCCGCGGTC ACGCTGCCGG CGGGCAATGC GCTGATCCTC
GCGGGTGCCG GGTCCGGCAA GACGCGGGTG CTGACGACGC GCATCGCCTG GCTGGTGCAG
ACCGGACAGG TCTCGCCGGC CGGCGTGATG GCGGTGACCT TCACCAACAA GGCCGCGAAG
GAGATGCTCA CGCGGCTCTC CACGCTGCTG CCGGTGAACC CGCGCGGCAT GTGGATCGGC
ACCTTCCACG GCTTGTGCAA CCGCTTCCTG CGCGCGCACT GGAAGCTGGC GGGCCTGCCG
CAGGGTTTCC AGATCCTCGA TGCGCAGGAC AGCGTCTCTG CGGTCAAGCG CATCGTTAAG
GCGATGAAGC TCGACGAGGA GCGCTACATC CCCAAGCAGT GCGCGTGGTT CATCGCCGGC
GCCAAGGAAG ACGGACTGCG CCCGCAGCAT ATCGAGGTGC GCGACGAGCT CACCCGCACG
CAGCAGGCCA TCTACCAGGC CTACGAAGAC CAGTGCCAGC GCGAGGGCGT GGTCGACTTC
GCCGAGCTGA TGCTGCGCAC CTACGAGCTA ATGCGCGACC ACGCCGAGCT GCGCCAGCAC
TACCAGCGGC GCTTCCGCCA CATCCTGGTC GACGAATTCC AGGACACCAA TCGCCTGCAG
TACGCGTGGT TGAAGATGTT CGCCGGCACC GACAACAACG TGCTCGCCGT CGGCGACGAC
GACCAGAGCA TCTACGCCTT CCGCGGCGCG CGTGTCGGCA ACATGGCCGA CTTCGAGCGC
GAGTTCCACG TTCAGCAAGT CGTGAAGCTC GAGCGCAACT ACCGCAGCTT CGGCAACATC
CTCGACAGCG CCAACGCGCT GATCGCGCAC AACTCGCGCC GCCTGGGCAA GAACCTGCGC
ACCGAGGCCG GCCCCGGAGA GCCGGTGCGC GTGTTCGAGG CCACCAGCGA CTTCGCCGAG
GCGCAGTGGT TCCTCGACGA GGCGCGCCAG CTGCAGCGCG ACGGCTCGCC GCGCAGCGAG
ATCGCAGTGC TCTACCGCAG CAACGCGCAG AGCCGGGTGA TCGAGAGCGC GCTGTTCAAC
GCCGGCGTGC CCTACCGCGT CTATGGCGGC CTGCGTTTCT TCGAGCGTGC CGAGATCAAG
CACGCGCTGG CTTACCTGCG GCTGATCGAG AATCCGAACG ACGACACCAG CTTCCTGCGC
GTCGTCAACT TCCCCACGCG TGGCATCGGC ACCCGCACGA TGGAGCTGCT GCAGGACGCC
GCGCGCAGCA GCGGCCGCAG CCTCTGGCAG AGCGTGGGGG CGATCGCCGG CAAGGGCGGC
AGCAACCTCG GCGCCTTCAC CGCGCTTGTC GACGCGATGC GCGACGCGAC GCGCGGCCTC
ACGCTGCGCG AGATCATCGA GCACGTGGTG CAGTCTTCCG GGCTGGCCGA CTTCTACCGC
AACGAGAAGG AAGGCGCCGA GCGGCTGGAG AACCTGGACG AACTGGTCAA CGCCGCCGAA
GCCTTCGTCA CGCAGGAGGG CTTCGGCAAG GACGCGGTGG CGCTGCCGGT CGACGAACAG
GCCGGCCGCA TCGCCGAGCG CCTGCCGGCC GCCGTGGCCC TGGTCGACAC CCAGCCCGAT
GCCGAGACCG GCGAGATCAT GAGCCCGCTC GCGGCCTTTC TCACCCACGC CGCGCTCGAG
GCCGGCGACA ACCAGGCGCA GGCCGGCCAG GACGCCGTGC AGCTGATGAC GGTGCACGCC
GCCAAGGGCC TGGAGTTCGA CCAGGTCTTC ATCACCGGCC TGGAGGAAGG CCTGTTCCCG
CACGAGAACG CGGCGGCCGA CCTCGACGGT CTGGAAGAGG AGCGCCGCCT GATGTACGTG
GCCATCACGC GCGCGCGCAA GCGGCTCTAC CTGAGCTTCA GCCAGACCCG CATGCTGCAC
GGCCAGACCC GCTACAACCT CAAGAGCCGC TTCTTCGATG AACTGCCCGA GGCTGCGCTG
AAATGGCTCA CGCCGAAGCT GCAGGGCTTC GGCTCGGGCT ATGCCCGCGA CTACCAGGCC
GCGTGGCAGC GCGGCACGGG GCTCGGCTCG ATGGTGGGCG CGGGACGCGT AGTGCCTGCT
TCGGCGCCGG CCGCCTTCGA AGCCCAGGCG CGCAGCACGC CGAACGGGCT GCGGTCCGGG
CAAGGCGTGT TCCACACCAA GTTCGGCGAG GGCGTGATCG TCACGCTCGA GGGCATCGGC
GCCGATGCCC GCGCCCAGGT CAACTTCGGC CGCCATGGCA TGAAGTGGCT GGCGCTGAGC
GTCGCGAAGC TGACGCCGGT CGACTGA
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| Protein sequence | MDVSVENDRA PPGEAAGLLR HLNPEQLAAV TLPAGNALIL AGAGSGKTRV LTTRIAWLVQ
TGQVSPAGVM AVTFTNKAAK EMLTRLSTLL PVNPRGMWIG TFHGLCNRFL RAHWKLAGLP
QGFQILDAQD SVSAVKRIVK AMKLDEERYI PKQCAWFIAG AKEDGLRPQH IEVRDELTRT
QQAIYQAYED QCQREGVVDF AELMLRTYEL MRDHAELRQH YQRRFRHILV DEFQDTNRLQ
YAWLKMFAGT DNNVLAVGDD DQSIYAFRGA RVGNMADFER EFHVQQVVKL ERNYRSFGNI
LDSANALIAH NSRRLGKNLR TEAGPGEPVR VFEATSDFAE AQWFLDEARQ LQRDGSPRSE
IAVLYRSNAQ SRVIESALFN AGVPYRVYGG LRFFERAEIK HALAYLRLIE NPNDDTSFLR
VVNFPTRGIG TRTMELLQDA ARSSGRSLWQ SVGAIAGKGG SNLGAFTALV DAMRDATRGL
TLREIIEHVV QSSGLADFYR NEKEGAERLE NLDELVNAAE AFVTQEGFGK DAVALPVDEQ
AGRIAERLPA AVALVDTQPD AETGEIMSPL AAFLTHAALE AGDNQAQAGQ DAVQLMTVHA
AKGLEFDQVF ITGLEEGLFP HENAAADLDG LEEERRLMYV AITRARKRLY LSFSQTRMLH
GQTRYNLKSR FFDELPEAAL KWLTPKLQGF GSGYARDYQA AWQRGTGLGS MVGAGRVVPA
SAPAAFEAQA RSTPNGLRSG QGVFHTKFGE GVIVTLEGIG ADARAQVNFG RHGMKWLALS
VAKLTPVD
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