Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1041 |
Symbol | |
ID | 4785644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 1110956 |
End bp | 1112311 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640089603 |
Product | type I secretion outer membrane efflux protein |
Protein accession | YP_001020237 |
Protein GI | 124266233 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCAGC GTTCCCCGCA CTGCCCGCCG TCGCCGCTGC CGCGGCGGCA CCGCCTGGCC CGGGCGCTGA CGGCCGGTCT GCTGCTCGGT GCCGCCGCGG TGGCGCAGGC TCAGAGCCTG CAGTCGCTGT ACGACGCCGC ACGCGGCTAC GACGCCAGCT ACCTGGCGGC CCGCGCGCTG GCCGATTCGG CACAGTTCCG CTACGAGCAG GTGAAGGCGC TCAACCGCCC GAGCGTGGCC CTGTCGGCGA GCACCACCCG CAGCGAGACC GACACATCGG CCGGCAGCGC GAGCGGCACC AGCACCGGCG CGCAGATCTC GGCGCTGCAA CCGCTGTTCA ACCGCAGCAA CAGCAGCACG ATCGATCAGG CCGAGAAGAG CTATGCGGTG TCGATGGCCG ACCTCGAGAG CGCCGAGCAG GACCTGGTGG TGCGGCTGAG CCAGGCCTAC TTCGACGTGC TGGCGGCACA GGACACGCTG GCGACGACAC GCGCCAACAA GACCGCCATC GCCGAGCAGC TGGCCTCGGC GAAGCGCAAT TTCGAGGTCG GCACCGCAAC CATCACCGAC ACGCGCGAAG CGCAGGCCCG CTACGACCTC GCCACCGCGC AGGAGATCGC CGCCGAGAAC GACCTGCGCG TACGGCGCAT CGCACTCGAC CAGCTCGTCG GGCGCACCGA CGTCGAACCG CGGCCGCTGA CGGTCCCGGT GCAGCTGCCC GAGGTGCTGC CGGCCAACGT GGAGGACTGG GTGACGCAGG CGGGCCAGTC GCCCAGCGTG CGCAAGGCCC AGCTGGCCTA CGAGGTGGCG CAGCTCGAGA CCGAGAAGGC GCGTGCCGGC CACCTGCCGA CAGTCGACCT GGTGGGCGGC GTCGGCCGCA ACCGCAACAC CGGCCGCACC GCCGGCAGCG GTCTGAGCGG CAGCACCACC AGCGCGCAGA TCGGCGTGGA GCTGAACCTG CCCCTGTTCG CCGGCTACTC GATCCAGAAC CGCGTGAAGG AAACGCTGTC GCTGGAGGAG AAGTCGCGCA ACGACCTGGA GTTCGCGCGC CGCAGCGTCA CCCAGGGCAC GCGCCAGGCC TACTTCACCG TCCAGTCGGG CCTGGCCACG GTGAAGGCCC TCGAAGCCGC CGAGGCCTCC AACAAGCTCG CGCTCGAGGC CACCCAGCTC GGCTACAAGG TCGGCGTGCG CGTCAACCTC GACGTGCTGA ACGCGCAGAC GCAGCTCTAC ACCACCCAGC GCGACCTGGC GCGCGCCCGC TACGACGTGG TGCTGGGCAA CCTGCTGCTG CGCCAGGCGG CGGGCACGCT CAAGCCCGAC GACGTGGGCA GCGTCAACCG GCTGCTCGCG CCCTGA
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Protein sequence | MPQRSPHCPP SPLPRRHRLA RALTAGLLLG AAAVAQAQSL QSLYDAARGY DASYLAARAL ADSAQFRYEQ VKALNRPSVA LSASTTRSET DTSAGSASGT STGAQISALQ PLFNRSNSST IDQAEKSYAV SMADLESAEQ DLVVRLSQAY FDVLAAQDTL ATTRANKTAI AEQLASAKRN FEVGTATITD TREAQARYDL ATAQEIAAEN DLRVRRIALD QLVGRTDVEP RPLTVPVQLP EVLPANVEDW VTQAGQSPSV RKAQLAYEVA QLETEKARAG HLPTVDLVGG VGRNRNTGRT AGSGLSGSTT SAQIGVELNL PLFAGYSIQN RVKETLSLEE KSRNDLEFAR RSVTQGTRQA YFTVQSGLAT VKALEAAEAS NKLALEATQL GYKVGVRVNL DVLNAQTQLY TTQRDLARAR YDVVLGNLLL RQAAGTLKPD DVGSVNRLLA P
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