| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1027 |
|---|
| Symbol | |
|---|
| ID | 4785630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 1097494 |
|---|
| End bp | 1098864 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640089590 |
|---|
| Product | putative transmembrane sensor histidine kinase transcription regulator protein |
|---|
| Protein accession | YP_001020224 |
|---|
| Protein GI | 124266220 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4564] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.573227 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACTCA AGAGCAAGAT CGTCCTCCTC GCCGTGGTGC CGCTGCTGGC GTCGATCGTG
CTGATCGCGC TGGCCGTGCG CCACCAGGAG CGCGCGCTGG CGGCGCGCGA ACGCGAGCTG
GTCGAGAGCG CCTACATGAG CTCCAAGCGC ACCGAGCTGC GCCACTACGT CGAGCTCGCG
CGCAGCACCA TCGCGCCGCT GTACGACTCG GGCGACGACA GCGAGGCCAC GCGCCAGGCC
GCGATGAAGC TGCTGGCGTC GCTGGACTAC GGCACCGACG GCTACTTCTT CCTCTACGAC
CTGCAGGGCC GGAGCCTGAT GCACCCACGC CAGCCCGAGC TGGTGGGCAA CGACCTGTGG
GAGCTGCGCG ACGAGGCGGG CCACCCGACC ATCCAGCAGC TGATCGCCAA GGCGAGCGAG
GGCGGCGGCT TCATCGACTA CCTGTGGCGC AAGCCATCCA CACGGCAGAC CACGCCCAAG
CTGGGCTACG TGATCGCGCT GCCGCGCTGG AACTGGATGC TCGGCACCGG CCTCTACCTC
GACGACGTGC AAGCCACGAT GGCGCAGCTG GACCATCAGG TGGCGGCCAA CATCGAGACC
ACGTTCCTGT GGATCGCCGG CATCGCGCTG TCGGGCATCG CGCTGATCAC GGTGTGCGGC
CTGGCGCTCA ACCTCAGCGA ACACAAGGAG GCCGACGCCA AGCTGCGCCA GCTCGCGCAG
CAGGTGGTGC AGTCACAGGA GTCCGAGCGC GCCCACCTCT CGCGCGAGCT GCACGACGGC
ACCAGCCAGA CGCTGGTGTC GATCAAGCTG CTGATCGAGT CGGCGATCGA GCAGATCGAG
CGCGAGCCGG CCCAGGCCGC CGTGCCGCTG GAGCGCGCCG CGGTGCGCCT GGCCGACGCG
CTGACCGAGG TGCGGCGCAT CTCGCACCGC CTGCGCCCGG CGATGCTCGA CGTGCTGGGC
CTGCCCGCAG CGCTGGAGCA CCTGGGCCGG GAGTTCGGCG ACCACAGCGG GCTGGCGTTC
TCGATGCGCA TGCGCGGGCC GTCGATCGAG TTGCCGGACG ACGTGAAGAC CGTGCTGTTC
CGCGTGACGC AGGAGGCGCT GACCAACATC GAGAAGCACG CCGCCGCGCA GTCGGTGCGC
ATCCGGCTGG CGTTCCGGCC CAGCGGCCTG CGGCTCGCGA TCCTCGACGA CGGCCGCGGC
TTCGACCTCG CCGCGGTGCA GCTCGACCCG CGTCGCGGGA TCGGCCTGCG CAACATGCGC
GAGCGCCTCG CCTCGATCGG CGGATCGTTC CGCATCCGCT CGCGCAGCGG TCTCACCGAG
CTGATCGCCG ACGTGCCCGA GGCGCAGCTG CGCCGCCTGA AGGAGGCCTG A
|
|---|
| Protein sequence | MRLKSKIVLL AVVPLLASIV LIALAVRHQE RALAAREREL VESAYMSSKR TELRHYVELA
RSTIAPLYDS GDDSEATRQA AMKLLASLDY GTDGYFFLYD LQGRSLMHPR QPELVGNDLW
ELRDEAGHPT IQQLIAKASE GGGFIDYLWR KPSTRQTTPK LGYVIALPRW NWMLGTGLYL
DDVQATMAQL DHQVAANIET TFLWIAGIAL SGIALITVCG LALNLSEHKE ADAKLRQLAQ
QVVQSQESER AHLSRELHDG TSQTLVSIKL LIESAIEQIE REPAQAAVPL ERAAVRLADA
LTEVRRISHR LRPAMLDVLG LPAALEHLGR EFGDHSGLAF SMRMRGPSIE LPDDVKTVLF
RVTQEALTNI EKHAAAQSVR IRLAFRPSGL RLAILDDGRG FDLAAVQLDP RRGIGLRNMR
ERLASIGGSF RIRSRSGLTE LIADVPEAQL RRLKEA
|
|---|
| |