| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0901 |
|---|
| Symbol | |
|---|
| ID | 4787224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 952500 |
|---|
| End bp | 953483 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640089462 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_001020098 |
|---|
| Protein GI | 124266094 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.149382 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGCG CCCTGATGCT GACGCAGGTG GACCGGCGCA CCCATGCCGA GCTGGTGGAG
CTGGACGAGT CGCAGTTGCC GCCCGGCGAC GTGACGGTGC GCATCGAGTA CTCCAGCCTC
AACTTCAAGG ACGCGCTCGC GGTCACCGGC CGCGGCGCGG TGGTGAAGAA CTGGCCACTG
GTGCCGGGGA TCGACCTGGC CGGCGTGGTC GAGCGCAGCA GCGACCCGGC CTGGCAGCCG
GGCGACCGCG TCGTGGTCAA CGGCTGGGGC CTGGGCGAAA CCGAATGGGG AGGGCTGGCG
CAGAAGGCGC GGCTGTCGCC GCAATGCCTG TTGCGGCTGC CGGCGGCCTT CACCACGCGC
GAGGCGATGG CCATCGCCAC GGCCGGCTAC ACCGCCGCGC TGTGCGTCAT CGCGCTGCAG
CGCCACGGCC TCGAGCCGGG CGCCGACGAG GTGCTGGTCA CCGGCGCGGC CGGTGGCGTG
GGCTCGGTGG CGGTGGCGCT GCTGGCCGGG CTGGGCTTCC GGGTGGTCGC GTCGACCGGG
CGGCCGGCGG AGGCCGAGTA CCTGCGCTTC CTCGGCGCCG CGGCGATCCT CGACCGGGCG
GAACTGTCGT CGCCCGGCAA GCCGCTGCAG AGCGAGCGCT GGGCCGGCGT GGTGGACACG
GTGGGCAGCC ACACGCTGGT CAACGCCTGC GCGCAGACGC AGTGGCACGG CGCGGTGACC
GCCTGCGGCC TGGCCCAGGG CAGCGACCTG CCCGGCACGG TGATGCCCTT CATCCTGCGC
GGCATCACGC TGTACGGCAT CAACTGCATG CGCGTCGACG AGGCCACGCG GCGCCTCGCC
TGGGAGCTGC TGGCGCAGCA TGTGCGCAGC GACCAGCTGG CGCAGATGAC GCAGGAGATC
GGGCTGTCCG AGGTGATCGC CTATTCGCCC GGCCTGCTGG ACGGCAAGGT GCGCGGACGC
ACCGTGGTCG ACGTCAACCG CTGA
|
|---|
| Protein sequence | MFRALMLTQV DRRTHAELVE LDESQLPPGD VTVRIEYSSL NFKDALAVTG RGAVVKNWPL
VPGIDLAGVV ERSSDPAWQP GDRVVVNGWG LGETEWGGLA QKARLSPQCL LRLPAAFTTR
EAMAIATAGY TAALCVIALQ RHGLEPGADE VLVTGAAGGV GSVAVALLAG LGFRVVASTG
RPAEAEYLRF LGAAAILDRA ELSSPGKPLQ SERWAGVVDT VGSHTLVNAC AQTQWHGAVT
ACGLAQGSDL PGTVMPFILR GITLYGINCM RVDEATRRLA WELLAQHVRS DQLAQMTQEI
GLSEVIAYSP GLLDGKVRGR TVVDVNR
|
|---|
| |