| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0871 |
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| Symbol | |
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| ID | 4787164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 909995 |
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| End bp | 910936 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640089432 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001020068 |
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| Protein GI | 124266064 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00440392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGT TCTCTGCGAT GCAGGCCTTC GTGCGCGTGG TCGAGGCCGG CAACTTCACG
AAGGCGGCCG ACTCGCTGCA GCTGCCCAAG CCCACGGTGA CGAGGCTGGT GCAGATGCTC
GAGGCGCAGC TGCAGACCAA GCTGCTGAAC CGCACGACGC GGCGCGTCAC GGTCACACCC
GACGGCGCGG CCTACTACGA CCGCGCGATC CGGCTGCTGG GCGACATCGA CGAACTCGAG
TCGAGCATGT CGCACGCGAA GACCAGCCCG CGCGGGCGGC TGCGCATCGA CGTCGGCTCG
TCGGTCGGCA CGCTGGTGCT GATCCCGGCG CTGCCGCAGT TCCATGCGCT CTATCCCGAC
ATCCAGATCG ACCTCGGCGT CAGCGACCGC CCGGTCGACC TGCTGAGCGA GAACGTCGAC
TGCGTGCTGC GCGGTGGCGA GCTGATCGAC CAGTCGTTGG TGGCGCGTCG CGTCGGCGAA
CTGCAGTTCC TGGCCGCCGC GTCGCCCGAT TACCTGAAGC GCCACGGCAT GCCGCGCCAT
CCGCGCGAGC TCGAGTCGGG CGCGCACGCG GTGATCGGCT TCTTCTCGGC GCGCACCGGC
CGGCAGTACC CGTTCGACTT CCACAAGGAC GGCGAACGCA TCGAGGTGGC CGGCCGCTAC
GTGCTGTCGG TCAACGACTC CAACGCCTAC GTGGCGGCCG GCCTAGCCGG ACTCGGCGTC
GTGCAGGCCG CGACCTTCAT GCTGCAGACC CACATCAGCC GCGGCGAGCT CGAGCCCGTG
CTGGCCGACT GGTGCTCGGA GCCGGTGCCG ATCCACGTGG TCTACCCACC CAACCGCCAC
CTCAGCGCCA AGCTGCGTGT GTTCGTCGAC TGGGTCGCGG AGCTGTTCGC GCGCGACGAC
CTGATGCAGC GCAGGAGCAG CCTGCCGCGC GTGCGTCGGT AG
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| Protein sequence | MDKFSAMQAF VRVVEAGNFT KAADSLQLPK PTVTRLVQML EAQLQTKLLN RTTRRVTVTP
DGAAYYDRAI RLLGDIDELE SSMSHAKTSP RGRLRIDVGS SVGTLVLIPA LPQFHALYPD
IQIDLGVSDR PVDLLSENVD CVLRGGELID QSLVARRVGE LQFLAAASPD YLKRHGMPRH
PRELESGAHA VIGFFSARTG RQYPFDFHKD GERIEVAGRY VLSVNDSNAY VAAGLAGLGV
VQAATFMLQT HISRGELEPV LADWCSEPVP IHVVYPPNRH LSAKLRVFVD WVAELFARDD
LMQRRSSLPR VRR
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