| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0843 |
|---|
| Symbol | |
|---|
| ID | 4787136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 878857 |
|---|
| End bp | 879645 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640089404 |
|---|
| Product | Sec-independent protein translocase TatC |
|---|
| Protein accession | YP_001020040 |
|---|
| Protein GI | 124266036 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
|---|
| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.293811 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCGCCC CCGACTCCCG CGACGAGCTC GAAGGCAGCG AGCAGCCTTT CGTCGCGCAC
CTGATCGAAC TGCGCGACCG GCTGATCCGC GCGGTGCTGG CGATCGTTGT CTGCTTCGGT
GCTCTGGCGC TCTGGCCCGG CCCGTCGGCG CTCTACGACC TGCTGGCCGC GCCGCTGGTG
GCGCACCTGC CGGCCGGCAC GACGCTGATC GCGACCAACG TGATCTCGCC GTTCCTGGTG
CCGCTGAAGA TCACGCTGAT GGCGGCCTTC ATGCTCGCGC TGCCGGTGGT GCTGTACCAG
GTGTGGGCCT TCGTCGCGCC CGGTCTCTAC ACGCACGAGA AGAAGCTGGT GATGCCGCTG
GTGGTGTCGA GCACGCTGCT GTTCCTGCTG GGCGTGGCGT TCTGCTACTT CTTCGTGTTC
GGGCAGGTGT TCAAGTTCAT CCAGAGCTTT GCGCCGAAGA GCATCACCGC GGCGCCGGAC
ATCGAGGCCT ATCTCGGCTT CGTGCTGAGC ATGTTCATCG CCTTCGGCGC GGCGTTCGAG
GTGCCGGTGG TGGTGGTGGT GCTGGCGCGC ATGGGCATCG TGTCGATCGA GAAGCTGAAG
GGCTTCCGCG CCTACTTCAT CGTCGTCGCC TTCATCATCG CGGCGATCGT CACGCCGCCC
GACGTGATCT CGCAGCTCGC GCTCGCGATC CCGATGTGCA TCCTCTACGA GATCGGGATC
TGGGCCGCCA AGGTGTTCAT CAAGCACACC CAGGCGCCCG ATGCGGCGGC CGAGGACGGC
GCCGTCTAG
|
|---|
| Protein sequence | MGAPDSRDEL EGSEQPFVAH LIELRDRLIR AVLAIVVCFG ALALWPGPSA LYDLLAAPLV
AHLPAGTTLI ATNVISPFLV PLKITLMAAF MLALPVVLYQ VWAFVAPGLY THEKKLVMPL
VVSSTLLFLL GVAFCYFFVF GQVFKFIQSF APKSITAAPD IEAYLGFVLS MFIAFGAAFE
VPVVVVVLAR MGIVSIEKLK GFRAYFIVVA FIIAAIVTPP DVISQLALAI PMCILYEIGI
WAAKVFIKHT QAPDAAAEDG AV
|
|---|
| |