Gene Mpe_A0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A0600 
SymbollysS 
ID4785701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp631016 
End bp632542 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content69% 
IMG OID640089159 
Productlysyl-tRNA synthetase 
Protein accessionYP_001019797 
Protein GI124265793 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1190] Lysyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.834751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CGCCCCCGAA CGCCGCCACG CCCGGCACCG ACGACAACCA GCTGATCGCC 
GAACGCCGCG AGAAGCTCGC TGCACTGCGT GCGCAGGCCC AGGCCACGGG GAGAGCCGCC
TTCCCCAATG ACTTCAAGCC GGGCGACCAT GCCGTCGACC TGCACCGCCT GCACGAGGGC
AAGAGCGCCG AGGAGCTGGA GGCGCTGGCC ATCCCGGCCC GCATCGCCGG CCGCATGATG
CTCAAGCGCG TGATGGGCAA GGCCTGCTTC GCGACGCTGC AGGACGGCTC GGGCCGCATC
CAGCTCTACA TCACGTCCGA CGCCGTCGGC CCGGAGGCGC TGGCCGCCTT CAAGCACTGG
GACCTGGGCG ACATCCTCGG CGCCGAGGGC ACGCTGTTCA AGACCCGCAC CGGCGAGCTG
AGCCTCAAGG TCGGCACGAT CCGGCTGCTG ACCAAGAGCC TGCGGCCACT GCCCGACAAG
TTCCACGGCA TGGCCGACCA GGAGCTCAAG TACCGCCAGC GCGAGGTCGA CCTGATCATG
GACGAGGCCT CGCGCGAGCG CTTCCGCGCG CGCAGCAAGG CCGTGAGCTC GATCCGGCAG
TTCATGGTCG AGCACGGCTT CCTCGAGGTC GAGACGCCGA TGCTGCACCC CATCCCCGGC
GGCGCGAACG CCAAGCCCTT CGTGACGCAC CACAACGCGC TCGACCAGCA GATGTTCCTG
CGCATCGCGC CCGAGCTCTA CCTGAAGCGG CTGGTGGTGG GCGGCTTCGA GCGGGTGTTC
GAGATCAACC GCAACTTCCG CAACGAGGGC GTGTCGGTCC GGCACAACCC CGAGTTCACG
ATGATGGAGT TCTACGCGGC CTACTGGACC CACCACGACC TGATGGACTT CACCGAGCAG
ATCCTGCGCC ACGCCGCGCG CAAGGCGGTG GGCACGGCGC AGCTCGCCTA CGGTGGGCAG
GCCGTCGACC TGGAATCGCC GTTCGCGCGG CTCTCGGTGC GCGACTCGCT GATCGCCCAT
GCAGGATTGA GCGCGGCGGA AGCCGCCGAC ACCACGGTGC TGCGCGCGAA GCTCGAAGCG
CATGGCGAGA AGGCTCCGGC GCACTGGTCG CTCGCCGAAC TGCAGTTCGG CCTGTTCGAG
GCGGCCGTCG AGGAAAAGCT GTGGCAGCCG ACCTTCATCG TCGACTACCC GGTGGAGGTG
TCGCCGCTGG CCCGCGCCTC CGATGCCGAC CCGACGATCA CCGAGCGCTT CGAGCTCTTC
ATCACCGGCC GCGAGTTCGG CAACGGCTTC TCGGAGCTCA ACGACCCCGA GGACCAGGCC
GCGCGCTTCG CGGCCCAGGC CTCGAACAAG GACGCCGGTG ACGAGGAGGC GATGTACTTC
GACACCGACT ACATCCGCGC GCTCGAGCAC GGCCTGCCGC CCACCGGCGG CTGCGGCATC
GGCATCGACC GACTGATGAT GCTGTTGACC GACTCGCCGA ACATCCGCGA CGTGATCCTG
TTCCCCGCGC TGCGGCGCGA GGGCTGA
 
Protein sequence
MTTTPPNAAT PGTDDNQLIA ERREKLAALR AQAQATGRAA FPNDFKPGDH AVDLHRLHEG 
KSAEELEALA IPARIAGRMM LKRVMGKACF ATLQDGSGRI QLYITSDAVG PEALAAFKHW
DLGDILGAEG TLFKTRTGEL SLKVGTIRLL TKSLRPLPDK FHGMADQELK YRQREVDLIM
DEASRERFRA RSKAVSSIRQ FMVEHGFLEV ETPMLHPIPG GANAKPFVTH HNALDQQMFL
RIAPELYLKR LVVGGFERVF EINRNFRNEG VSVRHNPEFT MMEFYAAYWT HHDLMDFTEQ
ILRHAARKAV GTAQLAYGGQ AVDLESPFAR LSVRDSLIAH AGLSAAEAAD TTVLRAKLEA
HGEKAPAHWS LAELQFGLFE AAVEEKLWQP TFIVDYPVEV SPLARASDAD PTITERFELF
ITGREFGNGF SELNDPEDQA ARFAAQASNK DAGDEEAMYF DTDYIRALEH GLPPTGGCGI
GIDRLMMLLT DSPNIRDVIL FPALRREG