| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0509 |
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| Symbol | pilB |
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| ID | 4787084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 547297 |
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| End bp | 549015 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640089067 |
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| Product | pilus biogenesis ATPase |
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| Protein accession | YP_001019706 |
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| Protein GI | 124265702 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0385141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATACCC TCGCCGATGC CCCGCAGAGT TCGCTGTCCG GCGTCGCGCG CGTGCTCGTG
CACGCGGGCA AGCTCAACGT CAAGACCGCC GAAGATCTGG TCCGCAGCGC CAAGGAGCAG
AAGCGCAGTT TCATCTCGGC GGTCCTGAGC GCTGGCGCCG TCAACCCTTC GGATCTTGCC
CATACGCTGT CCAGCGTGCT GGCGATGCCC TTGCTCGATC TGGCGGCGGT CGATCCGCAG
CGCCTGCCTC GCAACGTCAT CGATGCCAAG CTGGCCACCC AGTATCAGGT ATTGGTGCTG
GGCAAGCGCG GCAACCGCCT CTTCATCGCC GGGGCCGACC CCACCGACCA GGAGGCCGCT
GAACGCATCA AGTTCGCAAC GCAGCTGACG CCCGAGTGGG TGATCGTCGA GCACGACAAG
CTGTCCCGGC TCGTCGATGC AGCTACGACA ACGGCCAGCG AGTCTCTCGA GTCGCTGGTC
GCCGGTGATT TCGAGTTCGA CGTCACCGAG GAAGACACCA GCGCATCCGA CGCCGCCGAG
GTCACCACCG ACGTCGAGGA CGCACCGGTC GTTCGCTTCC TTCAGAAGAT GCTGATCGAT
GCGATCAACG CACGAGCCTC CGATCTGCAC TTCGAGCCGT TCGAATACAA CTACCGGGTC
CGCTTCCGCG TCGATGGCGA ACTGCGCGAG ATCACGCAAC CGCCGATTGC CATCAAGGAC
AAGCTCGCCT CCCGCATCAA GGTGATTTCC CGGCTCGACA TTGCCGAGAA GCGCGTGCCG
CAGGACGGCC GCATGAAGCT CAAGTTCGGC AGCAAGGCGA TTGATTTCCG GGTCAGCACC
CTGCCCACGC TGTTCGCCGA GAAGATCGTG ATCCGTATCC TCGACCCGTC GAGTGCCAAG
CTCGGCATCG AGGCGCTCGG CTACGAGAAG GTCGAGAAAG ACCGCTTGCT GGAAGCCATC
AAGCGCCCCT ATGGCATGGT GCTGGTCACC GGTCCCACAG GCTCCGGCAA GACGGTGTCT
CTGTACACCT GCCTGAACAT CCTGAACCAA CCCGGCGTCA ATATCTCCAC GGTGGAGGAC
CCGGCCGAAA TCAACCTCCC GGGCGTCAAC CAGGTCAACG TCAACGACAA GGCAGGACTG
AACTTCTCGG TCGCCTTGAA GGCCTTCCTG CGGCAGGATC CGGACGTCAT CATGGTCGGC
GAAATTCGCG ATCTCGACAC GGCGGACATC GCCATCAAGG CGGCGCAGAC CGGGCACATG
GTGATGAGCA CGCTGCATAC CAACGACGCG CCGACGACGC TGACCCGCCT GATGAACATG
GGCGTCGCGC CGTTCAACAT CGCCTCCAGC GTGATCCTGA TCACGGCGCA GCGGCTGGCG
CGCAAACTCT GCGAGAACTG CAAGGCGCCG GCCGATTACC CTCGCGAGGC GTTGCTTCGC
GCCGGCTTCG CTGAATCGGA CCTGGATGGC AGTTGGAAGC CCTATCGTGC CGTCGGCTGC
TCCAGTTGCA GCAATGGCTA CCGGGGGCGT GTCGGCATCT ACCAGGTCAT GCCGATCAGC
GAAGAGATCC AGCGCATCAT CCTGACGCAG GGCAATGCGG TCGACATCGC AAAGCAGGCA
CAGCAAGAGG GCGTGCGCGA TTTGCGTCAG TCGGGTCTGG TCAAGGTGCG AGCGGGTGTG
ACCACCCTGG AAGAAGTCAT CTCGGTCACC AACGAGTAA
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| Protein sequence | MDTLADAPQS SLSGVARVLV HAGKLNVKTA EDLVRSAKEQ KRSFISAVLS AGAVNPSDLA
HTLSSVLAMP LLDLAAVDPQ RLPRNVIDAK LATQYQVLVL GKRGNRLFIA GADPTDQEAA
ERIKFATQLT PEWVIVEHDK LSRLVDAATT TASESLESLV AGDFEFDVTE EDTSASDAAE
VTTDVEDAPV VRFLQKMLID AINARASDLH FEPFEYNYRV RFRVDGELRE ITQPPIAIKD
KLASRIKVIS RLDIAEKRVP QDGRMKLKFG SKAIDFRVST LPTLFAEKIV IRILDPSSAK
LGIEALGYEK VEKDRLLEAI KRPYGMVLVT GPTGSGKTVS LYTCLNILNQ PGVNISTVED
PAEINLPGVN QVNVNDKAGL NFSVALKAFL RQDPDVIMVG EIRDLDTADI AIKAAQTGHM
VMSTLHTNDA PTTLTRLMNM GVAPFNIASS VILITAQRLA RKLCENCKAP ADYPREALLR
AGFAESDLDG SWKPYRAVGC SSCSNGYRGR VGIYQVMPIS EEIQRIILTQ GNAVDIAKQA
QQEGVRDLRQ SGLVKVRAGV TTLEEVISVT NE
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