Gene Mpe_A0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A0501 
SymbolslmA 
ID4787098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand+ 
Start bp541439 
End bp542101 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID640089059 
Productnucleoid occlusion protein 
Protein accessionYP_001019698 
Protein GI124265694 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.957497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.22516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACA CGCCGATCCC TGAGCCGCTG GATGCCGCCG ACGACACGCC CGCCGAGGGG 
GTCGCCGCCG CAGCACCCGT GCGCAAGCGG CCCAAGCCGG GCGAGCGCCG CATCCAGATC 
CTCCAGACGC TGGCGTCCAT GCTGGAACAG CCCGGTGCGG AGCGCATCAC GACGGCGGCC 
CTGGCGGCCA AGCTCGACGT CAGCGAAGCG GCGCTGTACC GGCACTTCGC CAGCAAGGCG 
CAGATGTTCG AGGGGCTGAT CGATTTCATC GAGAGCAGCG TGTTCACGCT GGTCAACCAG 
ATCGTCGAGC GCGACACCGA TCCGCGCGAT CAGGTGCACA AGATGACCAC CGTGCTGCTG 
CAGTTCGGCG AGAAGAACCC CGGCATGTCA CGCGTGATGG CGGGCGATGC CCTGGTGTTC 
GAGAACGAGC GCCTGACGGC GCGCATGAAC CAGTTCTTCG ATCGCTTCGA GTCGCAGCTG 
CGACAGAGCC TGCGAGCGTT GGCCGAGGCC GGCGGGTCGC AGACGCCGAC CGTCGATGCC 
CAGGCGCAGG CTTCGGTCCT CGTCAGCTTC GTGCTGGGCC GCTTGCAGCG CTATGCGCGT 
TCGGGCTTCA AGCGCCTGCC GAGCGAACAC CTCGACGCGG CACTGCGGCA ACTCGCCACC 
TGA
 
Protein sequence
MSDTPIPEPL DAADDTPAEG VAAAAPVRKR PKPGERRIQI LQTLASMLEQ PGAERITTAA 
LAAKLDVSEA ALYRHFASKA QMFEGLIDFI ESSVFTLVNQ IVERDTDPRD QVHKMTTVLL 
QFGEKNPGMS RVMAGDALVF ENERLTARMN QFFDRFESQL RQSLRALAEA GGSQTPTVDA 
QAQASVLVSF VLGRLQRYAR SGFKRLPSEH LDAALRQLAT