| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0464 |
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| Symbol | ddl |
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| ID | 4784183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 504922 |
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| End bp | 505881 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640089022 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001019661 |
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| Protein GI | 124265657 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.132669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCA CCCCCGATCC CCGGTCCTTC GGCAAGGTCG CCGTGCTGAT GGGCGGCACC
TCGGCCGAAC GCGACATCTC GCTGATGTCC GGCGGCGGCG TGCTGAAGGC GCTGCAGGAC
GCCGGCGTCG ACGCCCACGC CTTCGATCCG AAGGATCACG AACTGGTCGA GCTGCGGCGC
CAGGGCTTCC AGCGCTGCTT CATTGCGCTG CACGGTCGGC ACGGCGAGGA CGGCACGGTG
CAGGGCGCGC TGGAGCTGCT GCGCATTCCG TACACCGGTT CGGGCGTGAT GGCGAGCGCC
ATCGCGATGG ACAAGATCAT GACCAAGCGC GTGTGGCTCG CCGAAGGGCT GCCGACGCCA
CGCTACGTGC GGCTCGCGCC CGACGAGCAG ACGCCCGAGC GGGTGCGCGG CGTGCCCGAC
GACCTGGGCC TGCCGTTGAT CGTGAAGCCG CCGCGCGAGG GCTCGTCGAT CGGCGTCACC
AAGGTGCTCG GCTATTCGCA GATGCAGGAC GCGGTGGCGC TGTCGGCCCG CCACGATCCC
GACGTGCTGT GCGAGGAGTT CATCGACGGC GCCGAGGTGA CCTGCCCGGT GCTGGGCGAG
GGCGCGAATG CGCGCGCGCT GCCGGTGATC CGCATCGTGC CGCCCGAGGC CGGCTACGAC
TACCAGAACA AGTACTTCAC CGACGAGGTG AAGTACCTCT GTCCGAGCGG CCTGCCGGCG
GACGAGGAGG CCGAGATCCA GCGCATCGTG CTGGCCGCCT ACCGAGCGCT GGGCTGCCGC
GGCTGGGGCC GGGCCGACCT GATGATCCGC GCCAGCGATC GCAAGCCCTT CCTGCTGGAG
ATGAACACCT CGCCGGGCAT GACCGGCCAT TCGCTGGTGC CGATGTCGGC CAAGGCCGCA
GGCCTCGGCT ACGAGCAGCT GTGCCTGCAC ATCCTGCAGG GAGCGGCGCT CGACGCCTGA
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| Protein sequence | MSATPDPRSF GKVAVLMGGT SAERDISLMS GGGVLKALQD AGVDAHAFDP KDHELVELRR
QGFQRCFIAL HGRHGEDGTV QGALELLRIP YTGSGVMASA IAMDKIMTKR VWLAEGLPTP
RYVRLAPDEQ TPERVRGVPD DLGLPLIVKP PREGSSIGVT KVLGYSQMQD AVALSARHDP
DVLCEEFIDG AEVTCPVLGE GANARALPVI RIVPPEAGYD YQNKYFTDEV KYLCPSGLPA
DEEAEIQRIV LAAYRALGCR GWGRADLMIR ASDRKPFLLE MNTSPGMTGH SLVPMSAKAA
GLGYEQLCLH ILQGAALDA
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