| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0148 |
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| Symbol | |
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| ID | 4784849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 155771 |
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| End bp | 157294 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640088696 |
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| Product | putative RNA polymerase sigma N (sigma 54) factor transcription regulator protein |
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| Protein accession | YP_001019345 |
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| Protein GI | 124265341 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCTT CCCTGCAGGT CCGTTTTTCG CAGCATCTGG CGCTCACGCC GCAGCTTCAG
CAGTCGATCC GGCTGCTGCA GCTTTCCACG CTCGAGCTTC ACCAGGAAGT CGAGCAGATG
CTGGAGCAGA ACCCCTTCCT CGAAGTGGAG GAAGATGCGC CGACCCCGTT CGACGCGCCG
GTGGAGCGCG CCACGGCCAC GGAGCGCCAG GCCGATGACG CCTGGGAGGG CTCGGGGTCC
GAGGTGGCCG CCGACCCCGA GCCGGTCGCG GTGGATGCGG CCGAGTTCGG CACCACCGAG
CGCGAGGACT GGGAGAACGG CACCGAGCGC GAGGACTTCG ACGGCATCCG CGAGACGCCC
GGCAAGGCCG GCAACAACGA CAGCGACGAG TTCGACCCCA TGGAGCGCAG CAGCGCCGGG
GTGAGCCTGC AGGACCACCT GCGCGACCAG TTGCGCGGCA TGCGCCTGAG CGACGAGGAC
CGCGGCGCGG TGATGGTGCT GATCGAATCG CTCGACGAGG ACGGCTACCT GGCCGACCCC
CTGGAAGAGA TCGCCCAGCG CCTGGCCGGC GACGAGGACG ACATCGCGGT CGAGGAGCTG
CTCGACCGCC TGCGCTGCGC GCTGAAGTGG CTGCACAACC TGGAGCCGCT GGGCGTCGGT
GCGCGCGACC TGTCGGAGTG CCTGACGCTG CAGCTGCGGG CCGGACCGCG CTGCGAGGCG
CAGATGATCG CGATCCTGAT CTGCAAGTAC CACCTCGAGT TGCTGGCGCG GCGCGACGGC
AAGAAGCTGA TGGCGGCCAC CGGCGCCGAC GAGGAGCTGC TGAAGGCCGC GCAGGCGCTG
ATCGTGCGCT GCGAGCCCAA GCCCGGCCGG CCCTTCACCA AGGCCGAGGC CAACATCATC
GTGCCCGATG TCATCGTGCA GAAGGCCGGC CGCGGCTGGC GCGTGGTGCT CAACCCCGAC
GTGATGCCCA AGCTGCGCAT CAACGACCTC TACGCCCAGG CCATCAAGCA GCAGCGGGGC
GCGCGCACCG AATCGGGCGC GGGCCTGAGC TCGCGGCTGC AGGAGGCGCG CTGGTTCATG
AAGAACATCC TGCAGCGCTT CGACACCATC CAGCGCGTGT CGCAGGCCAT CGTCGAGCGG
CAGAAGGCCT TCTTCAGCCA CGGCGCGATC GCGATGAAGC CACTGGTGCT GCGCGAGATC
GCCGACGAGC TGGGTCTGCA CGAGTCGACC ATCTCGCGCG TGACCACCGC CAAGTACATG
TCCACGCCCT ACGGCACCTT CGAGCTGAAG TATTTCTTCG GCTCCTCGCT CAACACCGAG
GCCGGTGGCA ATGCGTCGAG CACCGCGGTG CGTGCGCTGA TCAAGCAGCT GGTCAGTGCC
GAGGATGCCA AGAAGCCGCT GTCGGACAGC CAGCTCAGCA GCATGCTGGA AGAGCAGGGC
ATCCAGGTGG CGCGCCGCAC GGTGGCGAAG TACCGCGAGG CGCTGAAGAT CGCGCCGGCC
AACCTGCGGC GCACGATGAT GTAA
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| Protein sequence | MKPSLQVRFS QHLALTPQLQ QSIRLLQLST LELHQEVEQM LEQNPFLEVE EDAPTPFDAP
VERATATERQ ADDAWEGSGS EVAADPEPVA VDAAEFGTTE REDWENGTER EDFDGIRETP
GKAGNNDSDE FDPMERSSAG VSLQDHLRDQ LRGMRLSDED RGAVMVLIES LDEDGYLADP
LEEIAQRLAG DEDDIAVEEL LDRLRCALKW LHNLEPLGVG ARDLSECLTL QLRAGPRCEA
QMIAILICKY HLELLARRDG KKLMAATGAD EELLKAAQAL IVRCEPKPGR PFTKAEANII
VPDVIVQKAG RGWRVVLNPD VMPKLRINDL YAQAIKQQRG ARTESGAGLS SRLQEARWFM
KNILQRFDTI QRVSQAIVER QKAFFSHGAI AMKPLVLREI ADELGLHEST ISRVTTAKYM
STPYGTFELK YFFGSSLNTE AGGNASSTAV RALIKQLVSA EDAKKPLSDS QLSSMLEEQG
IQVARRTVAK YREALKIAPA NLRRTMM
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