| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0134 |
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| Symbol | |
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| ID | 4784834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 139342 |
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| End bp | 140460 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640088681 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001019331 |
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| Protein GI | 124265327 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.106114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.310056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCA CCCCCACCGC CTCCCTGCCG CCGCTCGCGA ACGACCGCTT CCTGCGCGCC
TGCCTGCGCC TGCCCACCGA CGTGACGCCG GTGTGGCTGA TGCGCCAGGC CGGCCGCTAC
CTGAGCGAGT ACCGCGACAC GCGCGCCAAG GCGGGCAGCT TCATGGGGCT GGCCACCAAC
CCGCAGTACG CCACCGAGGT GACGCTGCAG CCGCTGGACC GCTACCCGCT CGACGCGGCC
ATCCTGTTCA GCGACATCCT CACCGTGCCC GACGCCATGG GCCTGGGCCT GAGCTTCGCG
CAGGGCGAGG GCCCGCGCTT CGCGCACCCG CTGCGCGACG AGGCCGACGT GGCCAAGCTG
CAGGTGCCCG ACATGGAGAA GCTGCGCTAC GTGTTCGACG CGGTGGCGTC GATCCGGCGT
GCGCTGGCGC CGGCCGGCGC GCCGGGGCGG GTGCCGCTGA TCGGCTTCTC GGGCAGCCCG
TGGACGCTGG CTTGCTACAT GGTCGAGGGT GCGGGCAGCG ACGACTACCG CCTCGTCAAG
ACCCTGCTCT ACCGCCGGCC CGACCTGATG CACCGCATCC TCGAGGTGAA CGCCGATGCG
GTGGCGGCCT ACCTGAACGC GCAGATCGAG GCCGGCGCGC AGGCGGTGAT GATCTTCGAC
AGCTGGGGCG GCGTGCTGGC CGACGGCGCC TTCCAGCGCT TCAGCCTGGC CTACACCGAG
CGCGTGCTGC GCCAATTGAA GAAGGAGCAA GGCGGTTATC GCGTGCCGCA GATCGTGTTC
ACCAAAGGCG GCGGGTTGTG GCTGGAGGCC ATTGCCGACA GCGGCTGCGA CGTGGTGGGC
CTGGACTGGA CCATGAACCT CGGCGCGGCG CGCGCGCGCG TCGGCGACCG CGTGGCCCTG
CAGGGCAACC TGGACCCGAA CGTGCTGTTC GCCGACCCGG AGCAGATCCG CGCCGAGGTG
GCGCGCACGC TGGACAGCTA TGGCGCGCCG TCGGCCGGCA GCGGCCACGT GTTCAACCTC
GGCCACGGCA TCAGCCAGCA CACGCCGCCC GACAGCGTGA GCGTGCTGGT GGATGCGGTG
CATTCCTATT CACGGCAGCA GCGCGGCGCC GCCGGCTGA
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| Protein sequence | MTATPTASLP PLANDRFLRA CLRLPTDVTP VWLMRQAGRY LSEYRDTRAK AGSFMGLATN
PQYATEVTLQ PLDRYPLDAA ILFSDILTVP DAMGLGLSFA QGEGPRFAHP LRDEADVAKL
QVPDMEKLRY VFDAVASIRR ALAPAGAPGR VPLIGFSGSP WTLACYMVEG AGSDDYRLVK
TLLYRRPDLM HRILEVNADA VAAYLNAQIE AGAQAVMIFD SWGGVLADGA FQRFSLAYTE
RVLRQLKKEQ GGYRVPQIVF TKGGGLWLEA IADSGCDVVG LDWTMNLGAA RARVGDRVAL
QGNLDPNVLF ADPEQIRAEV ARTLDSYGAP SAGSGHVFNL GHGISQHTPP DSVSVLVDAV
HSYSRQQRGA AG
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