Gene Mpe_A0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A0040 
Symbol 
ID4783797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp38997 
End bp40706 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content70% 
IMG OID640088587 
Productparaquat-inducible protein 
Protein accessionYP_001019237 
Protein GI124265233 
COG category[R] General function prediction only 
COG ID[COG3008] Paraquat-inducible protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00684202 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.214843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCGCA TGAGCGACAC GCCGCCGCCC TCCTCTTCCG CCCCTGCGTC CCTGCCGGCG 
ACGGCCGAGC TGCCTGAAGC GGTGGCGGTG CCGCGCCGCC GCAGCCACGG CTATGCGGTG
TGGCTGATCC CCATCCTTGC GGCATTGATC GGCCTGACGC TGGGCGTGCG CGCCTGGCTC
GCGACCGGAC CCACGGTCAC CATCACCTTC AAGACCGCCG AGGACCTGGA GCCGGGCAAG
ACCAAGATCA AGTACAAGAA CGTCGACATC GGCGACGTGA AATCGATCGC GCTCGCCCCC
GACGGCAAGG GCGTGGTCGT CACCGCCGAG ATGACCCAGG GCGCGCAGAA GCTGCTGCTC
GACGACACGC GCTTCTGGGT GGTGCGGGCT CGCGTGGCGG GCAGCGGCGT CACCGGCCTC
TCCACACTGC TGTCGGGCGC CTACATCGGC ATCGACATCG GTACCTCCTC CGAGTCGCGG
CGCGAGTTCG TCGGCCTCGA CGTGCCGCCC AGCGTCACCG CTGACGAGCC GGGGCGCGAG
TTCATCCTGC GAAGCGCGGA TCTCGGCTCG GTCGACATCG GTTCACCGGT CTATTTCCGC
CGTGTGCAGG TCGGCAAGGT CACCGCGACG CGGCTCGACG CCGATGGCCG CGGGGTCACG
CTGCGGGTGT TCATTTCGGC GCCGCATGAG CAGCACGTGA CCGAGAACAC GCGCTTCTGG
CATGCCAGTG GCCTGGACGT CGCGCTCGAC GCCGGCGGCA TCAAGCTGCA GACGCAGTCG
CTGATCTCCA TCGTGCTCGG CGGCATTGCC TTCGGCGCGC CGGAGTCCGG TGCGCCGGGC
GCGGCGGCCG AGGCAGAGCA CAGCTTCGCG CTGTTCGAGA ACCAGGCGCT GGCCATGAAG
CGCACCAGCT CCGAGGTGAC GCCGATGGTG GCCCATTTCA CCGAATCGCT GCGCGGCCTG
GCGCCGGGCG CGCAGATCGA CTTCCGCGGC GTGGTGGTCG GTGAGGTCAC GTCGATCGAC
GTCAGCTACG ACCGCGACCG CAGGGAGTTC AGCTTCCCGG TCGGCATGGT GCTGTACAGC
GACCGGCTCG GCTCCAAGGT GAGCGCGGCG ATCGAACGGG CGCAGGTCGA CCCGACAGAG
CTGATGCGCC GCTCCATCGA GCGCGGCCTG CGCGCGCAGC TGCGCACCGC CAACCTGCTG
ACCGGCCAGC GCTACGTGGC GCTCGACTTC TTCCCCGGCG CGCGGCCGGT CAAGACGGCG
GCCGCCCCGG CCGCCGGCAG TGAAGCCCCG GTGCTCGAGA TCCCCACCAT CTCGGGTAGC
CTCGAGGACC TGCAGGCCAC GCTGACCAGC ATCGCCAAGC GCATCGAGAA CGTGCCGTTC
GACGAGATCG CCGCCGACCT GCGCACCGCG CTGCAGTCGC TCGACCGCAC GCTGAAGAAC
ACCGACGGGC TGATCGGCCG GCTCGACGGC CAGCTCGGCG AGCTGGTGCC CGAGCTGAAG
GCGGCGATCG CCGACACGCG TCGCACCATG AAGTCGGCCG ACAACCTGCT CGCCAGCGAC
ACGCCGACCC AGCAGGAGCT GCGGGAAGCG CTGCGCGAGG TGTCGCGCGC CGCGCAGTCG
ATGCGCGAAC TGACCGACTA CGTGCAACGC CGCCCGGAAT CCCTGCTGCG CGGCAAACCC
GGCGAGCCCG AGGAAGGCGG CAAGCGATGA
 
Protein sequence
MGRMSDTPPP SSSAPASLPA TAELPEAVAV PRRRSHGYAV WLIPILAALI GLTLGVRAWL 
ATGPTVTITF KTAEDLEPGK TKIKYKNVDI GDVKSIALAP DGKGVVVTAE MTQGAQKLLL
DDTRFWVVRA RVAGSGVTGL STLLSGAYIG IDIGTSSESR REFVGLDVPP SVTADEPGRE
FILRSADLGS VDIGSPVYFR RVQVGKVTAT RLDADGRGVT LRVFISAPHE QHVTENTRFW
HASGLDVALD AGGIKLQTQS LISIVLGGIA FGAPESGAPG AAAEAEHSFA LFENQALAMK
RTSSEVTPMV AHFTESLRGL APGAQIDFRG VVVGEVTSID VSYDRDRREF SFPVGMVLYS
DRLGSKVSAA IERAQVDPTE LMRRSIERGL RAQLRTANLL TGQRYVALDF FPGARPVKTA
AAPAAGSEAP VLEIPTISGS LEDLQATLTS IAKRIENVPF DEIAADLRTA LQSLDRTLKN
TDGLIGRLDG QLGELVPELK AAIADTRRTM KSADNLLASD TPTQQELREA LREVSRAAQS
MRELTDYVQR RPESLLRGKP GEPEEGGKR