| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_30181 |
|---|
| Symbol | |
|---|
| ID | 4778854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | - |
|---|
| Start bp | 2672542 |
|---|
| End bp | 2674059 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640088542 |
|---|
| Product | esterase/lipase/thioesterase family protein |
|---|
| Protein accession | YP_001019013 |
|---|
| Protein GI | 124024706 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4188] Predicted dienelactone hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.157772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTTTT TTCGTTCCCG TCTTTGGCTG CTTGCAATCA GTTTTGGAGC AGGGCTTGGA
CTTGTTCCAA GCTCTGCTCC TGCACTTGAA CGCTTGGTGT TTGATCTGCC TGTGCTGGAA
AGTCAGATTG AGTTTGAGCT TGGCGCTTCT CAGAGCGCTG GCGATCTAAT TGATGCCAAT
CCCGATTTTG TGGAGTTGGA TCGGGCTACG GATGGTGCTT TTGTGCGACT TCTCAATCAG
GTCTTTAACG CTCCCCTGCC AGCGCAGATT GAGAAGGTGG TTGAGAAGTC TGTCGGGCAG
CCTCTTTTGG AGCAGGCTCT GATCGCAGTA TCCAAGTTGG TTCAAGTTGA GGGGTTGCCC
AAAGACACCA GTGGAAGGAT GTTGCTTGAG GCGCTTTCGC GTGCTTCCAA GAGTGGTCAG
CCAACTGTGC TTGGTTTGTT GCGACAAATC CCTGGTCAAG CTGCATCCAT CAACTTGTCG
AAATTGGCCA GCTATGTCTC ACGGCTACAA CGTAATCAGC TAGCAGCAAA TCTGCTTGTG
GAGAAAGAGG CTTCTGTTCA GATTAAACCT GGATTACGCA TGCCGCTTAG CGGGTTGTGG
TTAAGTCAGC AAGTTGATTT TCAGGCTTCC CATCGCTCTA AACCGATACG GGTGGTGGTG
ATACAACCAA AGTCTCGCTC AAATGGTCGC TTGGTGGTCA TTTCACATGG GCTTTGGGAG
TCTCCGAGAG ATCTTCAGGG TTGGGCTGAA TATCTTTCTG CTAACGGTTA TACGGTGTTG
CTGCCGGAGC ATCAGGGCAG TGATGCTGAT CAGCAGAAGG CGATGTTGGC GGGGGATCAA
CCTCCACCGG GACCTCAAGA GTTGCGTCTT CGTGCGATGG ATGTGACTGC GATGCTCTCT
GCTGTTGAGT CAGGTGGTTT GTTGTCAAGA CTTTCCCTCA ATACAGATGA GGTCGCTGTT
GTTGGTCATT CATGGGGGGC GACTACAGCG ATTCAATTGG CTGGGGCACG CTCAACGGAT
GTGAAGCTCT CTGCTCGTTG TCATAACCAG GATGACCCTG AGCGCAATAT CAGCTGGATA
CTGCAGTGCA GTTGGCTTTC CAAAATCAAT GAGTCTTCTT TTGAAGACTC ACGGGTCAAG
GCAGTTGTGG CGGTGAGTCC GCCGTTACGT CTTCTATTTG ATCCCAGCAG AACTTCAGTT
TTGACGGCCA AGGTTTTGTT GGTTAGTGGC ACTCGTGATT GGGTGGTTCC TCCCGTGCCT
GAGGCTCTGA TGCCCATGCG TGATAGTGGT GCTTTGGAGT TTGGCCATCG CTTGGTGCTT
GCCCAAGATG GTGGTCACTT CAACTTGATG GCACCTGCAA ATCAGCCTCA GCCGGCGATT
TTGGCGCCCC TCATTCTTGC TTGGATTAAT GAACAGCTTG CAAATCCTGG TGTTGTCACC
TTCAGTGGCG GCGGTTGGGG TGATGCCGTG CATCCTTTAG TGGATGTGAC TGATGCGGCT
CTGAATTTGT ATCGCTGA
|
|---|
| Protein sequence | MMFFRSRLWL LAISFGAGLG LVPSSAPALE RLVFDLPVLE SQIEFELGAS QSAGDLIDAN
PDFVELDRAT DGAFVRLLNQ VFNAPLPAQI EKVVEKSVGQ PLLEQALIAV SKLVQVEGLP
KDTSGRMLLE ALSRASKSGQ PTVLGLLRQI PGQAASINLS KLASYVSRLQ RNQLAANLLV
EKEASVQIKP GLRMPLSGLW LSQQVDFQAS HRSKPIRVVV IQPKSRSNGR LVVISHGLWE
SPRDLQGWAE YLSANGYTVL LPEHQGSDAD QQKAMLAGDQ PPPGPQELRL RAMDVTAMLS
AVESGGLLSR LSLNTDEVAV VGHSWGATTA IQLAGARSTD VKLSARCHNQ DDPERNISWI
LQCSWLSKIN ESSFEDSRVK AVVAVSPPLR LLFDPSRTSV LTAKVLLVSG TRDWVVPPVP
EALMPMRDSG ALEFGHRLVL AQDGGHFNLM APANQPQPAI LAPLILAWIN EQLANPGVVT
FSGGGWGDAV HPLVDVTDAA LNLYR
|
|---|
| |