Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_24711 |
Symbol | rfe |
ID | 4776181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | - |
Start bp | 2172154 |
End bp | 2173302 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640087991 |
Product | glycosyl transferase family protein |
Protein accession | YP_001018467 |
Protein GI | 124024160 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACTCTCG CGAGCAGCCC CTTTGCTTTT GCTACGGCGA GCTTCGTGAT GGCTGCTGTG CTTACAACTT TGGTTGTCCC ACTCGTGCGG GCGCTAGGCC TTCATCTCGG TCTCACTGAT CAGCCTGATT CCCGCAAGCA GCACAGCACT CCGATGGTGC GTCTTGGTGG CATCGCCATG GTGCTGGGAT TTGGTTTGGC TCTGGCAGTG ACATGGGGGC TAGGGGGGTT TGGTTTACTT GCGCCTGCGA AGGATCAGCT GATCTGGTCC ACGCTGGCGG GGGCTCTTTG CTTTTTTGTG ATTGGCCTGG CAGATGATTT GTTCGCTTTG TCTCCTTGGC CTCGTTTGGC AGGACAGGTG GCCGTTGCGT TTGCGATGTG GACTCAGGGG GTACGCATTG GAACGATTGA GTTCCCCTGG TTGGGGGAAG GCTCTTCTTC TTTAATTGCC TTGCCGGATT TGCTTAGCCT TGCTGCCACG CTGGTTTGGC TTGTGGGTAT TACCAATGCC ATCAATTGGC TAGATGGTCT TGATGGTCTT GCGGCAGGAG TGGCTGGTAT TGCCGCTGTT GGTCTTGTGT CGGTCAGTTT TTCACTTCAT CAAGTGGCTG CAGGTTTTCT GGCAGCCGCT TTGGCGGGCT GTTGTCTTGG TTTTCTGCGC CATAACTTCA ATCCAGCCCG CATTTTTATG GGTGATGGTG GCTCCTATTT CCTTGGCTTT ACCTTGGCAG CAATCAGCAT CGTGGGACCA GCCAAGGGAC TCACCACCGT CAGTCTGTTG CTGCCACTGT TGATTTTGTC GCTGCCTTTG GCTGATATGT CGGCAGTGAT TATGGGGCGT TTGCGGGAGG GCCGTTCTCC CTTTTATCCT GACCGTCGCC ATCTTCATCA CCGTCTGCTG CGCGCAGGCT TCAGTCATCG CCGAACGGTG TTGTTGATCT ACGTGTTTAC GCAATGGCTA GCAGCATTGG CCCTTGTGGT GGCCAATGCT GAAATGCGTT TTTTGTGGTT GGCTTTAGCG ACAGCCATTC TCGTGGCGAC AGTCGTGATC AGCCGTCGTC AACGTAGTGC TGAAGGTGCC TTCGTAGACC CTTCTAGCTC CCTTGCAGCT CCTAGTGATC CACGTGCCTA TCGCGATGGT CATGGCTGA
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Protein sequence | MTLASSPFAF ATASFVMAAV LTTLVVPLVR ALGLHLGLTD QPDSRKQHST PMVRLGGIAM VLGFGLALAV TWGLGGFGLL APAKDQLIWS TLAGALCFFV IGLADDLFAL SPWPRLAGQV AVAFAMWTQG VRIGTIEFPW LGEGSSSLIA LPDLLSLAAT LVWLVGITNA INWLDGLDGL AAGVAGIAAV GLVSVSFSLH QVAAGFLAAA LAGCCLGFLR HNFNPARIFM GDGGSYFLGF TLAAISIVGP AKGLTTVSLL LPLLILSLPL ADMSAVIMGR LREGRSPFYP DRRHLHHRLL RAGFSHRRTV LLIYVFTQWL AALALVVANA EMRFLWLALA TAILVATVVI SRRQRSAEGA FVDPSSSLAA PSDPRAYRDG HG
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