Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_23981 |
Symbol | |
ID | 4777244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | - |
Start bp | 2111100 |
End bp | 2112863 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640087919 |
Product | hypothetical protein |
Protein accession | YP_001018396 |
Protein GI | 124024089 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.167552 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAGC TGCAGTCAGC AGTGCAGGCA TATCAGGGTA GAGATCTTGA CGATGCTGAG GCAATTTTCA AGCAGATTCT CGCTGTAAAT CCAAAGGAGC CAACTGCGCT GCATCTCCTC GGTTGTATTT ACAAAGATCG TGGACAACTC CAGCAGGCTG TTGAGTTAAT CCAGGCATCT ATTCGAGAAG ATGAGAGTAA TCCAATTCCA TTCTTTAATC TTGGCAAGAT CCTTGCTATC GCTGGTCAGC ATGAGAATGC AGTGGGCGTC TTCCAGGAGT CATTGAAGAG AAACCAGCAG ATCCCTGAAA CGTGGTTTTG CTTTGCCAAT GCTCTGAGGG AGATTGGGAA AACAGAGGAA GCAAAGCGGG CATATCGAAA TGCACTGCAA TTAAATCCTG CACATGCTGG AGCAGCAGGA AATTTAGGAG CACTGCTCAC CGATGATGGT GAGTTGGATG AGGCTGAAAA GGTATTGAGA AGGGCATTAG CGAGTAATCC TGAGGATATA AATTGCCTTG TAAATCTAGG CATTTTATTG AAGGAAGAGG GAGAGTTTGA AGAAGCGATC GCAAGTTATC GGAAAGCGAT TGAGGTGAAG CCTGATTTTG AAGATGCGTA TTTTAATTTA GGCCTTCTAT TGAAAGAAGT GGAGGGGAAG GTAGAGGAGG CGAGCGTGTT TTTTCAGAAG GCGATTGCCA TTTATCGGAA AGCGATTGAA GTGAAACCCG ATTCTGGGCA AGCGTACGTG AATTTAGTGA CTGTATTGAA TAAGGATGGT CGGCTTGATG AGGCTCGCGT TGCCATTGAA TGTCTTTTAA GCCTCAAGCC GCCAGATGAT CGACAGTCGC TTGATTTTTC TTGCGGCCAG CTCGTTCTCG ATTGGTATCG TATAAGAGTG AATGGTCTCT TCTGGGATGT CGAATTAAAA GGTTTTTTGG CGAGTAATTC GCACCTCTCT GCGGTCAGGT CCACAGATGC GATGTGCTTT CCCCCTCTTT TCCTAAAGGA TGGTAAAGAA GATGCATGTA GAAGAGAATT TTATGAAAAA GGATTTGTTA CCCAAAGAGG GGTCATTAGT GGCTCGGACT GTGCGGCACT TGTTGATGAA TTACCCGGCA TCGGCTTGAT GAGCGAGAGG CTAATTCAAA TTGTTTTGGA GAGAAACATT TTGAGGTCTG TTGTGAAATC TGCTTTTGAG CTTTCGGGAT TCCCTCATCT TATATGGAAT TGCATTTGCT TTGCTAAAGG GCCAGATGAC AAGGCTCATT CGGACGATTG GCATCTTGAC AATCATTACA ATATTTGGAC GTCAAAGTTG ATAGTCTATC TCAACTCTCA GAGTGACGAG CTGGGTGCTA CTGAGTTAGT TGAAGCTTCT TTGTCGAAAG AGCTTTCTGA AAAATCAGAT TATACGGGGC TTGTGACTGA TAGAGATTTC TACATTCAGT GTCTTTCTGG CTTAGTTGAT GAACTCGGGC TTGAGGCTGA GTCACTTGAT CCGCCTCATT ACACCTTTTC ACCTGATGAG GCCGGCACGG GTGTTTGGTT TTGTCCTGCA CGAGTGCTGC ATCGTGGAGT TAGTCCTAAG AAAGGACTTC GCCATGTGCT TACGTTTTCC TTGACACCAC TTCCTAGAGA TTGTCAGTGG TCCATGGAGC AGTGCGTCGA GAAGTCAGTA GAGATATTGA GGGACAAGAT TAAGCAAGGT ATGGAAGAAA TTGATATCAA CCCCTTTTGG TCTGTATCAA ATAGGTCTGT ATAG
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Protein sequence | MQQLQSAVQA YQGRDLDDAE AIFKQILAVN PKEPTALHLL GCIYKDRGQL QQAVELIQAS IREDESNPIP FFNLGKILAI AGQHENAVGV FQESLKRNQQ IPETWFCFAN ALREIGKTEE AKRAYRNALQ LNPAHAGAAG NLGALLTDDG ELDEAEKVLR RALASNPEDI NCLVNLGILL KEEGEFEEAI ASYRKAIEVK PDFEDAYFNL GLLLKEVEGK VEEASVFFQK AIAIYRKAIE VKPDSGQAYV NLVTVLNKDG RLDEARVAIE CLLSLKPPDD RQSLDFSCGQ LVLDWYRIRV NGLFWDVELK GFLASNSHLS AVRSTDAMCF PPLFLKDGKE DACRREFYEK GFVTQRGVIS GSDCAALVDE LPGIGLMSER LIQIVLERNI LRSVVKSAFE LSGFPHLIWN CICFAKGPDD KAHSDDWHLD NHYNIWTSKL IVYLNSQSDE LGATELVEAS LSKELSEKSD YTGLVTDRDF YIQCLSGLVD ELGLEAESLD PPHYTFSPDE AGTGVWFCPA RVLHRGVSPK KGLRHVLTFS LTPLPRDCQW SMEQCVEKSV EILRDKIKQG MEEIDINPFW SVSNRSV
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