Gene P9303_23641 details

Gene Information

• Locus tag: P9303_23641
• Symbol: tufA
• ID: 4776879
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 2083790
• End bp: 2084989
• Gene Length: 1200 bp
• Protein Length: 399 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640087884
• Product: elongation factor Tu
• Protein accession: YP_001018362
• Protein GI: 124024055
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0050] GTPases - translation elongation factors
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00485] translation elongation factor TU

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.201387
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTCGCG AGAAGTTTGA GAGGAACAAG CCTCACGTCA ACATTGGCAC CATCGGCCAT 
GTCGACCACG GCAAAACAAC CCTGACCGCA GCCATCACAA GTGTGCTTGC GAAAAAAGGT 
CAAGCCAAGG TGCAAGATTA CGCCGAGATC GACGGCGCAC CTGAAGAGCG TGAGCGCGGC 
ATCACGATCA ACACCGCCCA CGTGGAATAC GAAACCGATG GGCGTCACTA TGCACACGTG 
GACTGCCCCG GCCACGCGGA TTATGTCAAG AACATGATTA CCGGTGCGGC CCAGATGGAC 
GGCGCAATCC TTGTTTGCGC AGCAACCGAT GGTCCCATGG CTCAAACCAA GGAGCACATC 
CTTCTTGCCA AGCAGGTGGG CGTTCCTGCA CTGGTTGTCG CTCTCAACAA ATGCGACATG 
GTCGACGACG AGGAAATTAT TGAGCTCGTT GAAATGGAGA TCCGTGAACT CCTGAGCAGC 
TACGACTTCC CTGGTGATGA CATCCCCATA GTCCAAGTAT CTGGGCTCAA AGCCATTGAA 
GGTGAAGCTG AATGGGAAGC AAAGATCGAT GAGTTAATGG ACGCAGTTGA CACGTCCATA 
CCAGAACCCG AGCGAGAAAT CGAAAAACCT TTCCTAATGG CCGTAGAGGA CGTTTTCTCA 
ATCACTGGTC GTGGCACCGT TGCCACCGGA CGAATCGAAC GCGGCAAGGT CAAAAAAGGC 
GAGGAAATTG AAATTGTCGG CATTAGAGAC AGCCGCAAAA CCACCGTGAC CGGTGTGGAA 
ATGTTCCGTA AAGATCTTGA CGAAGGCTTA GCGGGAGACA ATTGCGGGCT CCTACTTCGC 
GGCATCGAGA AGGAAGACAT CGAGCGCGGC ATGGTCCTCG TCAAGCCAGG CTCAATTACA 
CCTCACACTA AATTCGAGGG TCAGGTTTAC GTCCTCAAAA AAGAAGAAGG TGGACGCCAC 
ACCCCCTTCT TCGCCGGATA CCGTCCACAG TTCTACATCC GAACCACTGA CGTGACTGGC 
CAAATTACCG CCTTCACAGC CGAAGACGGC TCCAATGTGG AGATGGTGAT GCCAGGCGAC 
AACATCAAAA TGACTGGTGA ATTGATCTGC CCTGTGGCCA TCGAACAGGG TATGCGCTTC 
GCCATTCGCG AAGGAGGCCG CACCATCGGT GCCGGAGTTG TCTCGAAGAT CATCCAATGA 

 

Protein sequence

MAREKFERNK PHVNIGTIGH VDHGKTTLTA AITSVLAKKG QAKVQDYAEI DGAPEERERG 
ITINTAHVEY ETDGRHYAHV DCPGHADYVK NMITGAAQMD GAILVCAATD GPMAQTKEHI 
LLAKQVGVPA LVVALNKCDM VDDEEIIELV EMEIRELLSS YDFPGDDIPI VQVSGLKAIE 
GEAEWEAKID ELMDAVDTSI PEPEREIEKP FLMAVEDVFS ITGRGTVATG RIERGKVKKG 
EEIEIVGIRD SRKTTVTGVE MFRKDLDEGL AGDNCGLLLR GIEKEDIERG MVLVKPGSIT 
PHTKFEGQVY VLKKEEGGRH TPFFAGYRPQ FYIRTTDVTG QITAFTAEDG SNVEMVMPGD 
NIKMTGELIC PVAIEQGMRF AIREGGRTIG AGVVSKIIQ