Gene P9303_23021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_23021 
SymbolrplC 
ID4776190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp2034182 
End bp2034838 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content59% 
IMG OID640087822 
Product50S ribosomal protein L3 
Protein accessionYP_001018302 
Protein GI124023995 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATCG GCATCCTTGG GAAGAAACTG GGCATGTCTC AGTTCTTCGA CGATCAAGGC 
AGAGCCATCC CGGTCACCCT GATCGAGGCC GGTCCCTGCC GCATCACCCA ACTAAAGACT
TCTGACATCG ACGGTTATGC CGCCGTGCAG ATCGGTTTCG GTGATACCCG CGAAAAATTG
ATCAACAAGC CTTCCAAAGG GCACCTCACC AAATCTGGCG AGGTGCTCTT GAAGCACCTA
CGCGAATATC GCGTCGAGGG CCTTGAAGGC CTAGAGCTGG GAGCAGCGAT CACCGTCGGC
AGTTTTGAAG CTGGCCAGAA GGTAGACGTC AGCGGCGACA CGATGGGGCG TGGGTTCTCT
GGCTATCAAA AGCGCCACGG CTTCAGCCGT GGTCCGATGA GCCACGGTTC CAAAAACCAT
CGAGAACCAG GCTCCACAGG CGCCGGAACC ACGCCAGGGC GGATTTATCC AGGCAAACGC
ATGGCTGGCC GCTACGGCGG CAAAAAGCGC ACCACCCGTG GACTCACCAT CCTCAAAGTG
GACAGCAACC GCAATCTCCT GGTGGTGAAG GGGTCGGTGC CTGGCAAGCC AGGCGCCCTG
CTCAACATCC GACCCGCAAA ACGCGTAGGC AGCAAGCCTG CTCAAGGAGG TAAGTGA
 
Protein sequence
MSIGILGKKL GMSQFFDDQG RAIPVTLIEA GPCRITQLKT SDIDGYAAVQ IGFGDTREKL 
INKPSKGHLT KSGEVLLKHL REYRVEGLEG LELGAAITVG SFEAGQKVDV SGDTMGRGFS
GYQKRHGFSR GPMSHGSKNH REPGSTGAGT TPGRIYPGKR MAGRYGGKKR TTRGLTILKV
DSNRNLLVVK GSVPGKPGAL LNIRPAKRVG SKPAQGGK