Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_23021 |
Symbol | rplC |
ID | 4776190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | + |
Start bp | 2034182 |
End bp | 2034838 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640087822 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_001018302 |
Protein GI | 124023995 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAATCG GCATCCTTGG GAAGAAACTG GGCATGTCTC AGTTCTTCGA CGATCAAGGC AGAGCCATCC CGGTCACCCT GATCGAGGCC GGTCCCTGCC GCATCACCCA ACTAAAGACT TCTGACATCG ACGGTTATGC CGCCGTGCAG ATCGGTTTCG GTGATACCCG CGAAAAATTG ATCAACAAGC CTTCCAAAGG GCACCTCACC AAATCTGGCG AGGTGCTCTT GAAGCACCTA CGCGAATATC GCGTCGAGGG CCTTGAAGGC CTAGAGCTGG GAGCAGCGAT CACCGTCGGC AGTTTTGAAG CTGGCCAGAA GGTAGACGTC AGCGGCGACA CGATGGGGCG TGGGTTCTCT GGCTATCAAA AGCGCCACGG CTTCAGCCGT GGTCCGATGA GCCACGGTTC CAAAAACCAT CGAGAACCAG GCTCCACAGG CGCCGGAACC ACGCCAGGGC GGATTTATCC AGGCAAACGC ATGGCTGGCC GCTACGGCGG CAAAAAGCGC ACCACCCGTG GACTCACCAT CCTCAAAGTG GACAGCAACC GCAATCTCCT GGTGGTGAAG GGGTCGGTGC CTGGCAAGCC AGGCGCCCTG CTCAACATCC GACCCGCAAA ACGCGTAGGC AGCAAGCCTG CTCAAGGAGG TAAGTGA
|
Protein sequence | MSIGILGKKL GMSQFFDDQG RAIPVTLIEA GPCRITQLKT SDIDGYAAVQ IGFGDTREKL INKPSKGHLT KSGEVLLKHL REYRVEGLEG LELGAAITVG SFEAGQKVDV SGDTMGRGFS GYQKRHGFSR GPMSHGSKNH REPGSTGAGT TPGRIYPGKR MAGRYGGKKR TTRGLTILKV DSNRNLLVVK GSVPGKPGAL LNIRPAKRVG SKPAQGGK
|
| |