Gene P9303_22781 details

Gene Information

• Locus tag: P9303_22781
• Symbol: recF
• ID: 4778680
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 2013493
• End bp: 2014551
• Gene Length: 1059 bp
• Protein Length: 352 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 640087797
• Product: recombination protein F
• Protein accession: YP_001018278
• Protein GI: 124023971
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1195] Recombinational DNA repair ATPase (RecF pathway)
• TIGRFAM ID: [TIGR00611] recF protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.259314
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGACGGAAA ATCGGCTGCT GGTCATTGGC CCCAACGGCA TCGGTAAATC CAACCTTCTC 
GAAGCAGTAG AGCTGCTCGG CAGTCTGCGC TCGCATCGCG CCAGCAGCGA CCAAGACTTG 
ATCCACTGGG AAGAACAGCG GGCCCTACTT CGCGCCATCG CTGATGACAC TGAGAAGCTC 
GAACTGGAAT TGCGGCGGCA AGGAGGTCGA CAAGCCCGCC GCAACGGCAA AACGCTCACC 
CGCCAATTGG ATCTAATCGG TCCACTGCGT TGCGTGGGGT TTAGCGCTCT CGATCTCAAT 
CTCGTTCGAG GCGAGCCTGC CCTGCGGCGC CAATGGCTTG ATCGCGTCGT ACAACAACTT 
GAACCGATCT ATTCAGATCT GATCAGTCGC TTCAACAAGC TGCTGCGTCA ACGAAGCCAG 
CTGTGGCGTC AGTGGCGCCA TATCCCGATT CAGGAGCGTG ATTCCCTCTT GGATGCCTTC 
GATGTACAGA TGGCTTTAGT CAGCACCCGC ATTCATCGAC GTCGCAGTCG AGCTCTCGCC 
CGCCTTGAAC CACTTGCAGC CCGATGGCAG GAAACCCTCA GCAAACAGAA GGAACGGTTG 
CGACTCGACT ATCAGCCAGG CAGCCAACTG GAAGGTGAGG AAGCGGAAGA ACCTTGGCGA 
TTGGCGATCG AAACACAGCT CCTAGACCAA CGCAGCGAAG AGGAACGATT GGGAAGTTGC 
AGGATCGGTC CTCACCGCGA CGAGGTGAGA TTGCTACTCA ACGATTCAGA AGCACGCCGC 
TTTGGCTCAG CAGGGCAACA GCGAACCGTG GTGCTGGCAC TCAAGCTTGC CGAACTGGAA 
CTCGTGGGCG AACTCTGCGG TGAACCCCCT CTGCTGTTAT TGGATGACGT TCTTGCGGAA 
CTGGATCCCG GCAGACAGTT GCTGCTGCTC GAGGCTGTCG GAGAGAAGCA TCAGTGCCTC 
GTTAGCGCGA CCCATTTGGA GGGTTTCCAG GATGAATGGC AACAACGATC ACAGATCATC 
GAAGCAGGAT CTTTGAATCG ATCGGAAGAG GTCCGCTAA 

 

Protein sequence

MTENRLLVIG PNGIGKSNLL EAVELLGSLR SHRASSDQDL IHWEEQRALL RAIADDTEKL 
ELELRRQGGR QARRNGKTLT RQLDLIGPLR CVGFSALDLN LVRGEPALRR QWLDRVVQQL 
EPIYSDLISR FNKLLRQRSQ LWRQWRHIPI QERDSLLDAF DVQMALVSTR IHRRRSRALA 
RLEPLAARWQ ETLSKQKERL RLDYQPGSQL EGEEAEEPWR LAIETQLLDQ RSEEERLGSC 
RIGPHRDEVR LLLNDSEARR FGSAGQQRTV VLALKLAELE LVGELCGEPP LLLLDDVLAE 
LDPGRQLLLL EAVGEKHQCL VSATHLEGFQ DEWQQRSQII EAGSLNRSEE VR