Gene P9303_22631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_22631 
Symbolrnd 
ID4778470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand- 
Start bp1998849 
End bp1999487 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content54% 
IMG OID640087781 
Productputative ribonuclease D 
Protein accessionYP_001018263 
Protein GI124023956 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.528712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACT TTTCTAAAGC TCCTGCAAGC TTTGTCGTTT TCGATGGGGA TCTCGACTCA 
GACTGGGCGA ATCGATATCT CAGAGCATCT GCTATTGCGG TAGACACTGA GGCCATGGGA 
CTTATTCATG GCCGCGACCG CCTCTGTCTT GTGCAGATTT GTGACCCTGC CGACAATGTG 
GCATGCGTGC GGATCGGTTT GGGTCAGACC TCTGCCCCTC GCTTGCAGAA GCTAATGGAG 
GCCACTTCTG TTGAAAAGGT GTTCCACTTT GCTCGCTTTG ATGTGGCCGC ACTTGCTAGC 
GGATTGGGCA TCTCCGTTTT GCCCATTTTC TGTACGAAGG TGGCCAGTCG CCTTGCACGA 
ACCTATAGCC CTCGCCATGG GTTGAAGGAG GTGGTGATGG AGTTGGTTGG AGTTGAACTG 
GATAAGCAGG CCCAGAGCAG TGATTGGGGA AGGGTTGAGG AACTCAGCGA TGTTCAGTTG 
GCCTATGCAG CCAACGATGC TCGATATCTG CTTCCGGCTA GGCAACGTCT AGAAATGATG 
TTGCGACGTG AGGGGGCGCT GGGAGATTGC TCAGCGTTGT TTCAGCTGCA TTCCTGTCAT 
CGCGGAACTG GATCGTTTGC GATTTACCCA GATCTTTGA
 
Protein sequence
MADFSKAPAS FVVFDGDLDS DWANRYLRAS AIAVDTEAMG LIHGRDRLCL VQICDPADNV 
ACVRIGLGQT SAPRLQKLME ATSVEKVFHF ARFDVAALAS GLGISVLPIF CTKVASRLAR 
TYSPRHGLKE VVMELVGVEL DKQAQSSDWG RVEELSDVQL AYAANDARYL LPARQRLEMM 
LRREGALGDC SALFQLHSCH RGTGSFAIYP DL