Gene P9303_20701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_20701 
Symbol 
ID4776632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand+ 
Start bp1822430 
End bp1823119 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content55% 
IMG OID640087579 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_001018071 
Protein GI124023764 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.355106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTGC TGCCTCGCCG ATTTGATCGT CTCAAGGCTG TTCTGGATTG CCGAATGGCA 
GATCTAACAG TTCTGCTTGA GCACGTCGAA AAGCCCCACA ACCTCTCAGC CATTCTGCGC 
AGCTGCGATG CGGTGGGTGT CCTGGAAGCC CATGCAGTGA ACTATTCAGG ACGCCTGCCC 
ACCTTTAACA GTACCGCTCA GGGAAGCCAA AAGTGGATAC CGCTCAAAGA GCACAGCAGC 
ATCGAAGTTG CCGTCAAGGC CATCAAGGAA AGTGGCTTTC GCCTTTATGG AACCCATCTA 
GGTGGAAACG CACGCGACTA CCGAGACTGC GACTTCTGCG AACCTACAGC CTTCGTCCTG 
GGAGCTGAGA AATGGGGCCT TAGTGAGCTG GCGACGCCAT TGATGGATGA AGGGATCTTC 
ATCCCAATGT GCGGCATGGT GCAGTCGTTG AATGTTTCGG TAGCAGCAGC AACCTTGCTA 
TTTGAGGCCC TACGTCAACG ACGGCTGGCT GGTATCGCAC CTCAAGCCGG CGAAGGCCTA 
GAACCAGCCC TTTATCAACA GCGCCTATTT GAGTGGGCCT ATCCAGAAGT TGCAGCATGG 
TGCCAGCAGG AAGGCAGGTC ATATCCGGCC CTTAACGACC AAGGCGAAAT CCAAGGAAGC 
CTCCCCCGCA ACGTGAGATT GCGCTGTTAA
 
Protein sequence
MPLLPRRFDR LKAVLDCRMA DLTVLLEHVE KPHNLSAILR SCDAVGVLEA HAVNYSGRLP 
TFNSTAQGSQ KWIPLKEHSS IEVAVKAIKE SGFRLYGTHL GGNARDYRDC DFCEPTAFVL 
GAEKWGLSEL ATPLMDEGIF IPMCGMVQSL NVSVAAATLL FEALRQRRLA GIAPQAGEGL 
EPALYQQRLF EWAYPEVAAW CQQEGRSYPA LNDQGEIQGS LPRNVRLRC