| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_16711 |
|---|
| Symbol | sir |
|---|
| ID | 4776276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | - |
|---|
| Start bp | 1458756 |
|---|
| End bp | 1460552 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640087180 |
|---|
| Product | sulfite reductase subunit beta |
|---|
| Protein accession | YP_001017680 |
|---|
| Protein GI | 124023373 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
|---|
| TIGRFAM ID | [TIGR02042] ferredoxin-sulfite reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGAAG GGCAGACAAC ATCTGGCCAA GCGGCAGATC TCAAGTTCGC AGCTTGTCTC
GCCAGTGGAG CAGACCTGAG CAAATTTGAA CAATTCAAGG CTGACAGCTG CTACTTACTA
GACCCCCTGG CTGCTGAACT TGAGAACAGC AGTGATCACT TCAGCAACGA CGCCGTTCAG
CTGCTCAAAT TCCACGGAAG CTATCAACAG GACAACCGAG ATAACCGCCA GAAAGGTGAG
GGTAAGGATT GGCAAATGAT GCTGCGTCTG CGCAGCCCTG GCGGACGTAT CCCACCATCA
CTGTTTTTAG CCTTAGATGA TCTGTCCAAT CGCCTTGGCA ATGGGAGCCT GCGGGCCACT
ACCCGCCAGG CGTTCCAGAT TCATGGTGTC CGCAAGGAGG ACCTGCGCGA AGTTATCAGC
ACAATCATCC GATCAATGGG ATCAACCCTG GCGGCTTGTG GTGATATCAC TCGCAACGTT
ATGGCACCAG CAGCTCCCTA TGAGAAAGGT GGTTATCCAG CTGCTCGACA ACTTGCCAAT
GAAATCGCCG ATGTTCTCAG CCCAACGGCA GCGGAGGGCT CCTATCTGGA CCTATGGGTG
AATGGAAGTG CGACCTACCG CATCCGCCCC TCCAGGCGAG TGAAAAAAGT TCGTACCCGC
CAGCATCAGG GCAACGTCTT CAGTGGAGAT ACCAAGGAAC CTCTATATGG CAAGACCTAT
TTGCCGCGCA AATTTAAGTG CGCCGTCACC GTGCCAGGCG ATAACTCAGT TGATCTACTT
ACCAATGACA TCGGTCTAGT TGTCTTTACT GCTGCAAACG GTGAAATCAA GGGTTGCAAT
GTCTATGTGG GTGGCGGCAT GGGTCGAACC CACAACAATG AACAGACATT CGCCCGTACA
GCTGATCCTC TTGGCTATGT GGCGGCAGAG CATGTATTGG ATTTGGTGCA GTCGATTTTG
GCCTTGCAAC GCGACTACGG AGACCGAAAG ACAAGGCGTC ATGCCCGCAT GAAATATCTT
CTCAATGATC AGGGGATCAG CTGGTTTAAA CAGGAACTCA AGAGCAAATA CTTCCTTCAT
CCAATCAAAG CGTTAAGGCC TGAACCAAAG AGCAAACTTG AGGACTATCT GGGCTGGCAT
CAGCAAAGCG TTGGCCAATG GTTTGTTGGT TTGCCACTGC TCTCTGGACG CTTGGAAGGA
GATCTCAAGA AAGGACTCCG CCAACTGGTG GAGACCTTTC AACTTGAAAT CCGCCTAACA
CCGAATCAGG ATCTACTGCT CTGCAATATC GGGACGTCAC AACGGTCCAG TGTTCGCAAA
GGTCTAGCCG CTCTAGGCAT CCGCGCCCCA GAGGCTCCGG CGATGCTGGC ACGGCATGCA
ATTGCTTGCC CTGCGTTGCC CTTATGTGGT CTGGCAGTAA CCGAAGCAGA GAGAACGCTG
CCTGTCTTGC TTGAGCGAAT TGATGCTCAG CTGCGACGTC TTGAAATTAC TAAATCGATC
CTGATCCGCA TGACAGGTTG TCCCAATGGA TGCGCGCGGC CCTACATGGC CGAGCTTGCT
CTAGTGGGAA GTGGTGTCGA TCAATATCAA CTCTGGCTGG GAGGCACCCC AAACCTGCAA
CGTCTTGCCA AACCCTATCT ACAGCGGATG CCCCTCGATC AACTCGAGAG CACACTTGAG
CCCCTATTGC TGAGCTGGAA GCAAGCTGGT GGTCGACGCA GCCTCGGAGA TCATGTCAAC
AAACTTGGCG ATCAAGCCGT CCTTGGTTTG CTGTCTGGTA CTGGCAAGGC TCCATAG
|
|---|
| Protein sequence | MTEGQTTSGQ AADLKFAACL ASGADLSKFE QFKADSCYLL DPLAAELENS SDHFSNDAVQ
LLKFHGSYQQ DNRDNRQKGE GKDWQMMLRL RSPGGRIPPS LFLALDDLSN RLGNGSLRAT
TRQAFQIHGV RKEDLREVIS TIIRSMGSTL AACGDITRNV MAPAAPYEKG GYPAARQLAN
EIADVLSPTA AEGSYLDLWV NGSATYRIRP SRRVKKVRTR QHQGNVFSGD TKEPLYGKTY
LPRKFKCAVT VPGDNSVDLL TNDIGLVVFT AANGEIKGCN VYVGGGMGRT HNNEQTFART
ADPLGYVAAE HVLDLVQSIL ALQRDYGDRK TRRHARMKYL LNDQGISWFK QELKSKYFLH
PIKALRPEPK SKLEDYLGWH QQSVGQWFVG LPLLSGRLEG DLKKGLRQLV ETFQLEIRLT
PNQDLLLCNI GTSQRSSVRK GLAALGIRAP EAPAMLARHA IACPALPLCG LAVTEAERTL
PVLLERIDAQ LRRLEITKSI LIRMTGCPNG CARPYMAELA LVGSGVDQYQ LWLGGTPNLQ
RLAKPYLQRM PLDQLESTLE PLLLSWKQAG GRRSLGDHVN KLGDQAVLGL LSGTGKAP
|
|---|
| |