Gene P9303_15371 details

Gene Information

• Locus tag: P9303_15371
• Symbol: dxs
• ID: 4777418
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: -
• Start bp: 1338911
• End bp: 1340845
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640087046
• Product: 1-deoxy-D-xylulose-5-phosphate synthase
• Protein accession: YP_001017546
• Protein GI: 124023239
• COG category: [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG1154] Deoxyxylulose-5-phosphate synthase
• TIGRFAM ID: [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.326891
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGTCTGA GCGAGTTAAC CCATCCGAAT CAGCTTCATG GCTTGAGCAT TGCCGAGCTT 
GAGGATGTAG CACGTCAGAT ACGGGAACGC CATCTTGAGG TGGTGTCCAC CAGTGGAGGT 
CATTTGGGGC CTGGGCTCGG TGTTGTTGAA CTCACCCTTG CTCTTTATCA AACTCTTGAT 
CTAGATCATG ATCGAGTTGT ATGGGACGTT GGCCATCAGG CTTATCCACA CAAGCTGATT 
ACTGGCCGAT ATGGCGACTT CAATACCTTG CGTCAGCAGG GTGGTGTCGC TGGCTATCTG 
AAGCGTTGTG AAAGTTCTTT CGATCATTTT GGTGCCGGCC ATGCCAGCAC CTCGATATCA 
GCAGCACTGG GCATGGCCGT TGCTCGTGAG CGTCGTGGTG AATCGTTCAA ATGCGTAGCT 
GTAATTGGTG ATGGGGCTCT TACTGGCGGC ATAGCACTAG AAGCGATTAA TCATGCCGGC 
CATATGCCCA ACACACCTTT TCTGGTTGTT CTCAACGACA ACGACATGTC GATTTCTCCG 
CCAGTAGGAG CGTTGTCGAC TCATCTAAAT CGCATGCGCC ACAGTGCGCC TGTGCAGTTC 
ATCTCGGATA GCGTCGAGGA GAGGGTCAAG AGTCTGCCTT TCATGGGAGG GGAACTGCCT 
GCCGAACTCG ACCTGCTCAA GGGCAGTATG CGCCGATTAT CCGTGCCGAA GGTAGGGGCT 
GTTTTTGAGG AGCTTGGCTT CACCTACATG GGCCCTATTG ATGGCCATGA CATTGAACGC 
ATGGTTCGAA CCTTTGAGAC GGCTCACAAG GTTGGTGGCC CTGTACTCGT TCATGTGGTT 
ACGACCAAAG GCAAGGGCTA TCCCTATGCC GAAGCAGATC AAGTTGGCTA TCACGCCCAA 
TCAGCGTTTG ATCTAATTAC TGGTAAAGCT CTTCCCTCAA AAGGAAAGAA ACCACCGAGT 
TACAGCAAGG TGTTTGGCGA GACGCTCATT AAGCTTTGTC AGCAGGACAG CACTGTCGTT 
GGAATCACAG CCGCGATGGC CACAGGTACT GGCCTTGACC TCCTGCAAAA GGCTGTTCCT 
GAGCAATACA TCGATGTAGG TATCGCTGAA CAGCATGCTG TAACTCTTGC TGCTGGGATG 
GCTTGTGAGG GGCTCAAGCC TGTGCTGGCG ATTTACAGCA CATTCCTGCA GCGCGCCTTC 
GACCAATTGA TCCACGACGT GGGAATTCAG AACCTGCCAG TGACCTTTGT GATGGATCGC 
GCAGGCATTG TTGGCGCTGA TGGACCGACC CATCAGGGTC AGTACGACAT CAGTTATTTC 
CGCGCTATTC CTAATTTCAC CGTGATGGCG CCCAAGGATG AGGCTGAACT TCAACGCATG 
TTGGTGACAT GTCTTCAGCA TCAAGGCCCT GCAGCTCTCC GTATTCCAAG AGGATCAGGC 
GAGGGAGTAC CTCTGCTTGA TGAAGGCTGG GAGCCTTTAG CAATTGGTCG AGGCGAAGTG 
CTTTGTGAAG GTGATGATCT ATTAATCGTT GCTTATGGAG TAATGGTGCC TGCTGCCATG 
ATCACAGCTC AGCTGTTGCA GGAAGCAGGT GTCAAGGCCA CTGTGATCAA TGCTCGCTTC 
CTAAGACCAC TTGATCAAGC CTTGATTCAT CCGTTAGCCC GTCGTATCGG TCGTGTCGTC 
ACGATGGAGG AGGGTGCTCT TGCGGGTGGT TTTGGTGCAG CTGTGGTTGA GTCCCTTAGT 
GATCAAGATG TCTTGGTGCC AACGTTCCGA ATTGGAATCC CTGATCAATT GGTAGACCAT 
GCCAGTCCCC AACAGAGCCG GGAAGCACTG GGGCTCACAC CAACACAGAT GTCTGAACGA 
ATTCAAGAAC ACTTTTGCTT GAATTCGCAG CCTTCTCTTG TAGGGCAGGA AGCACCGCAG 
GCCCTGTCAA CCTGA 

 

Protein sequence

MRLSELTHPN QLHGLSIAEL EDVARQIRER HLEVVSTSGG HLGPGLGVVE LTLALYQTLD 
LDHDRVVWDV GHQAYPHKLI TGRYGDFNTL RQQGGVAGYL KRCESSFDHF GAGHASTSIS 
AALGMAVARE RRGESFKCVA VIGDGALTGG IALEAINHAG HMPNTPFLVV LNDNDMSISP 
PVGALSTHLN RMRHSAPVQF ISDSVEERVK SLPFMGGELP AELDLLKGSM RRLSVPKVGA 
VFEELGFTYM GPIDGHDIER MVRTFETAHK VGGPVLVHVV TTKGKGYPYA EADQVGYHAQ 
SAFDLITGKA LPSKGKKPPS YSKVFGETLI KLCQQDSTVV GITAAMATGT GLDLLQKAVP 
EQYIDVGIAE QHAVTLAAGM ACEGLKPVLA IYSTFLQRAF DQLIHDVGIQ NLPVTFVMDR 
AGIVGADGPT HQGQYDISYF RAIPNFTVMA PKDEAELQRM LVTCLQHQGP AALRIPRGSG 
EGVPLLDEGW EPLAIGRGEV LCEGDDLLIV AYGVMVPAAM ITAQLLQEAG VKATVINARF 
LRPLDQALIH PLARRIGRVV TMEEGALAGG FGAAVVESLS DQDVLVPTFR IGIPDQLVDH 
ASPQQSREAL GLTPTQMSER IQEHFCLNSQ PSLVGQEAPQ ALST