| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_14891 |
|---|
| Symbol | metH |
|---|
| ID | 4777287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | - |
|---|
| Start bp | 1287009 |
|---|
| End bp | 1290653 |
|---|
| Gene Length | 3645 bp |
|---|
| Protein Length | 1214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640086999 |
|---|
| Product | putative methionine synthase |
|---|
| Protein accession | YP_001017500 |
|---|
| Protein GI | 124023193 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
|---|
| TIGRFAM ID | [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.123192 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGACA GGATGACAGC AGGCCCATTG GATATCACCA GACCAGAATC AGCTTTTTTG
GCACGCCTCC ACTCGTCAGA ACGTCCTGTA CTTGTTTTTG ATGGTGCCAC GGGTACATCC
CTGCAAAAAC AGGATCTCAG TGCTGATGAT TTTGGTGGTG CATTACTAGA AGGCTGTAAT
GAAAATCTTG TCATTACTCG ACCAGATGCA GTGAGGGAGG TCCATCGCCA ATTTCTTGAA
TCAGGTTGCG ATGTTATTGA GACAAATTCC TTTGGTGCTG CTTCCATTGT TCTGGCGGAA
TACGGATTAG AAGACCAGGC CTTTGAACTA AATAGGCAAG CTGCACAGTT AGCTAAAGCA
ATGGCAGCTC AATACAGCAC AAAAGATCAA CCTCGTTTTG TCGCAGGATC CATCGGACCA
ACAACAAAGT TGCCCACACT TGGACATATC GCATTTGACA CGATGCGTGA TTCTTTCCAA
GAACAAGCAG AGGGGCTATT AGCAGGTGAT ATTGACCTTT TCATTGTTGA GACTTGTCAG
GACGTCTTAC AAATCAAGGC CGCTTTGCAA GGAATCGAAT CTGCATTCTT AAAAGCTGGT
GAACGTCGCC CTATCATGGT TTCAGTGACA ATGGAAACCA CAGGAACGAT GCTTTTGGGT
TCAGACATCG CTTCTGTGGT GACAATTTTA GAACCATTTC CTATTGATAT TCTTGGTCTT
AATTGTGCAA CTGGTCCTGA ACAAATGAAG GATCATATAC GTTATCTGTC AGAACACTCA
CCTTTTACAA TTAGTTGCAT TCCCAATGCA GGGCTGCCAG AAAATATTGG CGGGGTTGCT
CATTACAGAC TAAAGCCACT GGAACTAAAA ATGCAACTCA TGCATTTTGT AGAGGATCTG
GGTGTTCAAG TCATAGGTGG TTGTTGCGGA ACGACTCCAG AACACACTTC TGCTTTGGCA
GAACTTGCAA AAGAGATGCG TGCTGCTGAA AGAGCATGTC GGCAAGGTGA AAAGGAACAC
CAACGTCAAC TCTTCGGTTA TGAACCATCA GCTGCTTCAA TTTATGGAAT TACTCCCTAT
CACCAAGACA ATTCGTTCTT GATCATTGGC GAACGTCTCA ATGCAAGCGG TTCAAAGAAA
GTTAGAGAGC TATTGAATAG TGAAGACTGG GATGGTCTTG TTGCTCTTGC ACGAGGACAG
ATTAAAGAGA ATGCACATGT TCTTGATGTT AATGTCGACT ACGTTGGGCG TGATGGTGAG
AAAGATATGA ATCAACTTGT TAGTCGTCTT GTCACTAACA TTAATCTTCC ATTGATGCTC
GACTCAACAG AATGGCAGAA AATGGAGGCA GGGCTAAAGG TTTCAGGTGG TAAATGTATA
CTTAATTCCA CCAACTACGA GGATGGAGAG GAACGTTTCT TCAAGGTTTT AGATCTGGCG
AAAAAATATG GTGCTGGATT AGTCATTGGC ACCATCGATG AGAATGGTAT GGCAAGAACA
GCGATGCAGA AGGTCGCGAT TGCAAAACGG GCTTATCGTG ATGCAACTGA ATATGGAATA
CCTGCTCATG AAATATTCTA TGATCCACTA GCACTGCCAA TTTCAACTGG TATAGAAGAG
GATAGACGAA ATGGCCTTGA GACAATAGAG GCAATACGAA TTATTCGTGA AGAGCTACAG
GGTGTACATG TTGTTCTAGG TGTCTCTAAT GTAAGCTTCG GATTATCTCC AGCTGCCAGG
ATTACTCTCA ACTCGGTATT TCTTCATGAC TGTACTGATG CTGGAATGGA TGCAGCTATA
GTTTCACCAG CAAAAATTTT ACCTCTCAAC AAAGTAAGTG ATGAACAGCA AAAGATATGT
CGTGATTTAA TAAATGACCA AAGACGCTTT GAAAATGACA TCTGTATCTA CGATCCATTA
ACAAAACTAA CGAGTCTATT TGAGGGGGTT AGCGCCAAGG AAGCACGCGC TTCAGGCCCT
TCATTAGCTG ATTTACCTGT TGAAGATCGA CTCAAGCAGC ACATTATTGA TGGAGAGAGA
ATTGGACTGA ATGAAGCCCT CGATGAAGGG TTGGAATCTT ACAAGCCTCT ACAACTTGTC
AATACATTTC TGCTTGATGG AATGAAGGTT GTTGGAGAGC TTTTCGGTTC AGGGAAAATG
CAACTCCCCT TTGTTCTTCA ATCGGCTCAA ACGATGAAGG CAGCCGTTGC TTACCTTGAA
CCGTATATGG AAAAATCAGA AGGAGACAAC TCATCTAAAG CAAAATTCCT AATTGCTACA
GTAAAAGGCG ATGTACATGA TATTGGCAAA AATCTAGTAG ATATTATTTT AACAAATAAT
GGTTATGAGG TGATTAACTT AGGGATTAAA CAGGACGCGG CTTCAATTAT AAATGCTCAA
AAGACACATC AGGCAGATTG TATTGCGATG AGTGGACTAT TAGTAAAGTC AACAGCATTC
ATGAAGAATA ACCTTCAGGA ATTTAATGAT TCTGGTATTT CCGTTCCAGT GATATTAGGT
GGTGCAGCTC TGACCCCTAG ATTTGTAAAC CACGATTGCA GTGAAGTCTA TAAAGGGAAG
CTTATTTATG GCAAGGATGC ATTTACAGAT CTAAGGTTTA TGGACGCCTA TGTAAAGGCA
CTTTCTAATG ATCGTTGGGA TGATTGTAGA GGTTTTCTTG ACGGCACTCC TGATGGCTTG
ACTCTAGGAG GTCAATCTAC TGAATCTGAT TCTCCTCCAT CTAATAAAGA AGAACAGCCT
CAAGAGGAAA ACGAAAAGAA CATCCAACAT ATTAATTTAC CAGTTAATAC TAGTCGTTCT
GAAAAAGTCA CCCAAGAAGA CGCAGTAACT CCTCCATTCC TTGGTTCAAA ACATCTGAAA
TTAGACAAAA TTCCACTTGA TGAGATCATT CAATATCTAG ACCGAAACGC TTTATTTTCA
GGACAATGGC AAATACGTAA GAGAAAGGAT CAATCTCGTG AGCAATATGA TCAGTATATT
AATGATGAGA TAGAACCAAT ATTGCAGCAT TGGCTCCAAA GAATTCGTAA CGAGTCACTT
TTACACCCTG GAGTCGCATA TGGGTATTTC CCATGTGGTC GGAAAGATAA TGATCTTTTG
GTCTTCAATA ACGAAGGCAA TAGTCTACTA GGCCAGTTTA ATCTTCCACG ACAAAAAAGT
GGAAATAGAT ATTGTATTGC AGATTTCTAT AGAGACCTGG AAGAGGGCTT GCCTAAGGAT
ATTTTACCTA TGCAAGCAGT AACAATGGGC GAGAATGCGA GTATTTTTGC GCAGAAGTTA
TTTGAATCAG ATGCATATAC TGACTATCTC TTTTTTCATG GACTTTCAGT TCAACTGGCT
GAAGCTCTCG CAGAATGGAC GCATTCTCGA ATACGTTGTG AGTGTGGTTT TAAATCAGAC
GAGCCTAAAA CTTTGCAAGA TGTTCTTGCA CAGCGGTACA GAGGTAGTCG GTTTTCATTC
GGCTATCCTG CCTGCCCAAA CGTTGGCGAT TCTCGCCAAC AATTGAAGTG GTTAAAAGCC
GACTCAATCG GATTGACAAT GGATCCAAAT GATCAGCTAC ACCCAGAGCA GAGCACAACC
GCTCTGGTGA CTCTTCACAG TAAGGCTAGA TATTTCAGTG CCTAA
|
|---|
| Protein sequence | MRDRMTAGPL DITRPESAFL ARLHSSERPV LVFDGATGTS LQKQDLSADD FGGALLEGCN
ENLVITRPDA VREVHRQFLE SGCDVIETNS FGAASIVLAE YGLEDQAFEL NRQAAQLAKA
MAAQYSTKDQ PRFVAGSIGP TTKLPTLGHI AFDTMRDSFQ EQAEGLLAGD IDLFIVETCQ
DVLQIKAALQ GIESAFLKAG ERRPIMVSVT METTGTMLLG SDIASVVTIL EPFPIDILGL
NCATGPEQMK DHIRYLSEHS PFTISCIPNA GLPENIGGVA HYRLKPLELK MQLMHFVEDL
GVQVIGGCCG TTPEHTSALA ELAKEMRAAE RACRQGEKEH QRQLFGYEPS AASIYGITPY
HQDNSFLIIG ERLNASGSKK VRELLNSEDW DGLVALARGQ IKENAHVLDV NVDYVGRDGE
KDMNQLVSRL VTNINLPLML DSTEWQKMEA GLKVSGGKCI LNSTNYEDGE ERFFKVLDLA
KKYGAGLVIG TIDENGMART AMQKVAIAKR AYRDATEYGI PAHEIFYDPL ALPISTGIEE
DRRNGLETIE AIRIIREELQ GVHVVLGVSN VSFGLSPAAR ITLNSVFLHD CTDAGMDAAI
VSPAKILPLN KVSDEQQKIC RDLINDQRRF ENDICIYDPL TKLTSLFEGV SAKEARASGP
SLADLPVEDR LKQHIIDGER IGLNEALDEG LESYKPLQLV NTFLLDGMKV VGELFGSGKM
QLPFVLQSAQ TMKAAVAYLE PYMEKSEGDN SSKAKFLIAT VKGDVHDIGK NLVDIILTNN
GYEVINLGIK QDAASIINAQ KTHQADCIAM SGLLVKSTAF MKNNLQEFND SGISVPVILG
GAALTPRFVN HDCSEVYKGK LIYGKDAFTD LRFMDAYVKA LSNDRWDDCR GFLDGTPDGL
TLGGQSTESD SPPSNKEEQP QEENEKNIQH INLPVNTSRS EKVTQEDAVT PPFLGSKHLK
LDKIPLDEII QYLDRNALFS GQWQIRKRKD QSREQYDQYI NDEIEPILQH WLQRIRNESL
LHPGVAYGYF PCGRKDNDLL VFNNEGNSLL GQFNLPRQKS GNRYCIADFY RDLEEGLPKD
ILPMQAVTMG ENASIFAQKL FESDAYTDYL FFHGLSVQLA EALAEWTHSR IRCECGFKSD
EPKTLQDVLA QRYRGSRFSF GYPACPNVGD SRQQLKWLKA DSIGLTMDPN DQLHPEQSTT
ALVTLHSKAR YFSA
|
|---|
| |