Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_14321 |
Symbol | aspC |
ID | 4778705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | - |
Start bp | 1226544 |
End bp | 1227722 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640086941 |
Product | aminotransferases class-I |
Protein accession | YP_001017443 |
Protein GI | 124023136 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACTCC CGCCTCATCT TTCCGACCGA GTCGTTGCCC TTCAGCCCTC ACTCACACTG GCAATCAGTG CTCGAGCAAA GGCTCTTCAG CAAGAAGGCC GCGACATTTG CAGCATGAGT GCTGGTGAGC CGGATTTCAA TACCCCTGAA TTCATCATTG ATGCCACGGT GAAGGCACTC CGTGATGGCA TCACCCGTTA TGGCCCTGCC GCTGGAGACC CTGAACTGCG TGAGGCAATA GCCACCAAGC TCAGCAAAGA AAACACTGTG CCAACCAATG CAGAGCAAGT GTTGGTGACC AATGGAGGCA AGCAAGCAAT CTTTAACTTG TTTCAGGTGA TCCTCAATCC AGGCGATGAG GTTTTAATCC CTGCTCCTTA TTGGCTGAGT TATCCAGAAA TGGCCCGCTT AGCCGGTGCA AAGGTGACAA CACTTCCCTC CACTCCAGAA AACGGTTTCT GTCTAGATCT CAACAACCTA GAAGCTTCCA TCGGCTCAAA AACCCGTCTG TTAATACTTA ATTCCCCGGG CAACCCAACC GGTCGTGTGA TGGCACGCAA GGAGCTGGAA GCTTTGGCTG ATCTGCTAAG AAATTATCCC CAGATCCTTG TCATGAGTGA TGAGATCTAC GAGTTCATTC TTGAAGACGG GCAACAGCAT CACAGCTTCT CTGCTATAGC ACCAGATCTT TCAGACAGAA CCTTCATCGT TAACGGCTTT GCCAAGGGCT GGGCAATGAC TGGTTGGCGG TTGGGTTATC TAGCCGGCCC CGCTCATGCA GTGAAAGCGG CCACTGCCCT CCAAAGCCAG AGCACGAGCA ATGTCTGCAG TTTCGCTCAG CGTGGAGCCT TGGCCGCGCT GCAAGGCTCA AGGGAGTGTG TGAAGAAGAT GGTTAATAGC TACAACACCC GACGCGAACT CCTCGCCTCT GGCTTGCTTG GCCTTGAAGG GATCAGCCTG ATCTCTCCAA AAGGTGCGTT TTATGCCTTC CCAAAACTAC CTGAAGGAAG CCTCGACTCA GTAAGTTTCT GTCAGCAAGC TCTTGAAAAC TATGGGCTTG CCATGGTTCC AGGTGCCGCA TTCGGAGACG ACAGTTGCAT ACGCCTCACT TGTGCTGTGT CACATAAGAC GATTTGCGAT GGACTAGAAC GTCTCCGCAA AGCTCTAAAA CAGAGCTAA
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Protein sequence | MPLPPHLSDR VVALQPSLTL AISARAKALQ QEGRDICSMS AGEPDFNTPE FIIDATVKAL RDGITRYGPA AGDPELREAI ATKLSKENTV PTNAEQVLVT NGGKQAIFNL FQVILNPGDE VLIPAPYWLS YPEMARLAGA KVTTLPSTPE NGFCLDLNNL EASIGSKTRL LILNSPGNPT GRVMARKELE ALADLLRNYP QILVMSDEIY EFILEDGQQH HSFSAIAPDL SDRTFIVNGF AKGWAMTGWR LGYLAGPAHA VKAATALQSQ STSNVCSFAQ RGALAALQGS RECVKKMVNS YNTRRELLAS GLLGLEGISL ISPKGAFYAF PKLPEGSLDS VSFCQQALEN YGLAMVPGAA FGDDSCIRLT CAVSHKTICD GLERLRKALK QS
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