| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_10131 |
|---|
| Symbol | |
|---|
| ID | 4777925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | + |
|---|
| Start bp | 923704 |
|---|
| End bp | 924756 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640086522 |
|---|
| Product | light-harvesting complex protein |
|---|
| Protein accession | YP_001017027 |
|---|
| Protein GI | 124022720 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03041] chlorophyll a/b binding light-harvesting protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.379961 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAAACTT ATGGAAATCC TAACCCCACC TATGGGTGGT GGGCAGGAAA TGCTGGAACT
ACAAATCGAT CAGGAAAATT CCTGGCAGCG CATATTGCCC ACACAGGTTT GATGGCCTTC
TGGGCAGGAT CGTTCACCTT ATTTGAACTT TCCCGTTATG ACCCCTCAGT ACCCATGGGG
CATCAGCCTC TGGTTGCCCT CCCTCATCTG GCAACTCTTG GAATAGGCGT CGGTGATGGT
GGTGTCATAA CTGATACTTA CCCAATTGTT GTGACGGCAG TCCTGCACCT GGTTCTATCC
ATGGTTTATG CAGCTGGCGG ACTTATGCAC TCCCTCCTAT TCAATGGAGA CATTGGCGAA
ATGGGAGTTA AGTGGGCTAG AAAGTTTGAC TTTAAGTGGG ATGATCCAGA CAAGTTGACC
TTTATTCTTG GTCATCACTT ATTCCTATTA GGCCTTGGCA ACGTTCAATT TGTTGAATGG
GCTAAGTATT ACGGCTTGTA TGACAATGCA GAAGGGGTAG TACGAACTGT AGTACCAAAC
CTGAACATTG GCATGGTTTG GAATGCTCAG TTTAATTTCC TAGCTATTAA TAGCCTGGAA
GATGTAATGG GCGGCCATGC CTTCCTCGCA TTGTTCATGA TGTCTGGTGG CCTTTGGCAC
ATTGTTACCA AGCAAGCTGG TGAATACACC ACGTTTAAAG GTAAAGGAAT CCTTAGTGCT
GAAGCTCAGC TCTCATGGGC CCTTGCAGGT GTAGGTTGGA TGGCTTTAGT TGCTGCCTTC
TGGTGTGCTT CTAACACAAC CATTTATCCA GATACATTCT TCGGTGAAGT TCTAGATCTC
AAATTCAGTA TCTCCCCTTA TTGGGTTGAC ACTGCAAATC TTCCTGAAGG AACCTACACA
TCACGTGCTT GGTTGACCAA CATCCACTAC TACTTGGGAT TCTTCTATAT CCAAGGTCAT
CTGTGGCATG CCCTCAGAGC TCTCGGATTT GATTTCAAGA GAGTTTCCAA TGCTATCGGC
AATGCCGACA GCGCAACAAT TACTCTGAAC TGA
|
|---|
| Protein sequence | MQTYGNPNPT YGWWAGNAGT TNRSGKFLAA HIAHTGLMAF WAGSFTLFEL SRYDPSVPMG
HQPLVALPHL ATLGIGVGDG GVITDTYPIV VTAVLHLVLS MVYAAGGLMH SLLFNGDIGE
MGVKWARKFD FKWDDPDKLT FILGHHLFLL GLGNVQFVEW AKYYGLYDNA EGVVRTVVPN
LNIGMVWNAQ FNFLAINSLE DVMGGHAFLA LFMMSGGLWH IVTKQAGEYT TFKGKGILSA
EAQLSWALAG VGWMALVAAF WCASNTTIYP DTFFGEVLDL KFSISPYWVD TANLPEGTYT
SRAWLTNIHY YLGFFYIQGH LWHALRALGF DFKRVSNAIG NADSATITLN
|
|---|
| |