Gene P9303_07751 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_07751 
Symbolrps1b 
ID4778351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp713694 
End bp715139 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content56% 
IMG OID640086284 
Product30S ribosomal protein S1 protein B, putative Nbp1 
Protein accessionYP_001016791 
Protein GI124022484 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.761988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTCA CAGGCCCCGA ATGGCCAAAC CAAGGTGGAT CCCTCCAGCC CAACCGCCTC 
TGCAGCCTCT GGCCAGCTGA GATGGGCAAA GCGCCTGCAA GAAATAGACA TCAGCACCAA
TCTGCGAACA GAACCACACC CTGCCTGTCA GAATGCTTGA CCGACGACCC CAAGGCCCCC
ATGGCCGGAT CAGGCAGTCC GCAGCCCAAT AGACCAAAGC CCCCTAAACC CGCAGCGGAA
GCCCCCCGCA AGCCCCTGCA GGTCATGCAC ATCAGCAGGC GTGGGGAGCA AGAAAAGCTA
GTACGAGAAG CCGCCGAAAC AACTTCTCCT GGCAGCGAAG CAACTACAGG ATCAGGCCAG
CTCAGCAACG CCCCCAATCG ATCCGTCTCA GCTGATGCAG CCTCAGATGA GAGTCGTTTT
GATCTCGGCG AGCTGCAAAA CATGACGATG GCCGATCTAC TTGGTCCGGC CGATCAGTCA
CGCCGAAGCG GTGCGGCCCC CAAGGGCAAC GATTATCGAA ACGAAGAAGG GCAATCCAAC
CCAGCACGCA GTGTCGACGA TTTCGACTTC GATGAAGACG CCTTCTTGGC TGCTCTAGAT
GAAAACGAAC CAATTGGAAC CACAGGGGAA GTGGCTACAG GCAAGGTCAT CGCTTTGGAA
AGTGATGGTG TTTACGTCGA CATCGGCGGG AAAGCACCAG GCTTTATGCC CAAAAATGAA
TGCGGCCTTG GCGTAATTAC CAACCTCAAA GAGCGCTTCC CAAAGGGTTT AGAGGTCGAA
GTACTCGTCA CCCGAGAGCA AAATGCCGAT GGGATGGTCA CCATCAGCTG TCGAGCTCTA
GAGCTGCGTA AGAGCTGGAG CAAGGTGCAG CAGATGGAGA AGGAAGGCAA GGTCGCCCAG
GTCAAGGTCA ATGGATTCAA CCGTGGTGGA GTGACCTGCG ACCTTGAAGG CCTGAGAGGA
TTTATCCCCC GCTCTCAGCT CCAAAATGGA GAGAATCACG AAGCGCTTGT CGGAAAAACC
CTTGGTGTGG CCTTCTTAGA AGTCAATCCA GAAACCCGCA AGCTGGTGCT TTCAGAGAAG
CGGGCCGCTA CCGCCGCCCG CTTCTCTGAA CTTGAAGTAG GACAGCTCGT GGAAGGTCAA
GTCGTAGCAG TGAAGCCCTA CGGTTTCTTC ATAGACCTAG GCGGTGTGAG TGGCCTCCTT
CACCAATCCA TGATCACCGG TGGCAGTCTT AGATCCCTGC GGGAGGTATT CAACCAAGGC
GATCGAGTCA AAGCCTTGAT CACCGAAATG GACCCTGGTC GCGGACGCAT TGCCCTGAAC
ACAGCCCTAC TGGAAGGACA ACCGGGCGAA CTCCTAATCG AAAAAGATAA GGTTATGGCT
GAAGCGACTG ATCGAGCCAA CAAAGCTCGT AACGTCCTTA GGCAGCAGGA ACAGTCAGCA
GGATGA
 
Protein sequence
MLFTGPEWPN QGGSLQPNRL CSLWPAEMGK APARNRHQHQ SANRTTPCLS ECLTDDPKAP 
MAGSGSPQPN RPKPPKPAAE APRKPLQVMH ISRRGEQEKL VREAAETTSP GSEATTGSGQ
LSNAPNRSVS ADAASDESRF DLGELQNMTM ADLLGPADQS RRSGAAPKGN DYRNEEGQSN
PARSVDDFDF DEDAFLAALD ENEPIGTTGE VATGKVIALE SDGVYVDIGG KAPGFMPKNE
CGLGVITNLK ERFPKGLEVE VLVTREQNAD GMVTISCRAL ELRKSWSKVQ QMEKEGKVAQ
VKVNGFNRGG VTCDLEGLRG FIPRSQLQNG ENHEALVGKT LGVAFLEVNP ETRKLVLSEK
RAATAARFSE LEVGQLVEGQ VVAVKPYGFF IDLGGVSGLL HQSMITGGSL RSLREVFNQG
DRVKALITEM DPGRGRIALN TALLEGQPGE LLIEKDKVMA EATDRANKAR NVLRQQEQSA
G