Gene P9303_01571 details

Gene Information

• Locus tag: P9303_01571
• Symbol: gyrB
• ID: 4776678
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 174585
• End bp: 176552
• Gene Length: 1968 bp
• Protein Length: 655 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640085656
• Product: DNA gyrase subunit B
• Protein accession: YP_001016177
• Protein GI: 124021870
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGAAG ACTCCAAAGT CCAGGCTGCC TATGGCGCCG AACAAATTCA GGTGCTGGAA 
GGGCTAGAGC CCGTTAGGAA GCGTCCGGGG ATGTACATCG GCTCCACTGG GCCAAGGGGG 
TTGCATCACC TTGTCTTTGA GGTTGTCGAC AACTCTGTTG ATGAGGCCTT GGCTGGGCAC 
TGTGATGAGA TTCTCGTGGT GCTTGGGCCA GATGGTTCCG CATCAATAGC TGACAATGGC 
CGTGGCATTC CCACCGACGT TCATTCCCGG ACAGGCAAGA GTGCCTTGGA AACGGTGCTC 
ACCGTGCTAC ATGCTGGCGG TAAGTTCGGC AGTGGCGGTT ACAAGGTCTC TGGCGGCTTG 
CATGGAGTTG GTGTATCTGT CGTCAATGCC CTGAGTGAAT GGGTGGAAGT GACGGTGCGG 
CGTCAAGGAC AGGTGCACCG TCAGCGCTTT GAACGTGGGA CCGCGATCGG TAGTCTTCGT 
TCCGAAGCCC AGCCTGCTTC AGAGAAGGGG CGCACTGGCA CGAGCGTTTG TTTTAAGCCG 
GACGAAGAGA TATTTACTGT TGGCATTGTT TTCGATTACG CCACCCTGTC TGCTCGTTTG 
CGTGAACTGG CTTATCTCAA TGGTGGGGTG CGGATTGTTT TCCGCGATGA GCGTCAGCCT 
GTTTTAGATG CTGAAGGGGC TCCTCATGAG GAGGTCTATT TTTATGAGGG CGGTATCAAA 
GAATATGTCA CCTATATGAA TGCGGAAAAG GATGCTCTTC ATCCCGAAAT TATTTATGTG 
AATTCTGAAA AGGATAATGT GCAGGTTGAA GCAGCACTGC AATGGTGTGT TGATGCTTAT 
TCAGACAGCA TTCTCGGATT TGCTAATAAT ATTCGCACTG TAGATGGGGG TACTCATATT 
GAGGGGCTGA AGACAGTCCT TACTCGCACT CTCAATACTT TTGCCCGTAA GCGTGGCAAA 
CGCAAGGAAG CCGATTCTAA TCTGGCTGGA GAAAATATTC GTGAAGGACT TACGGCTGTT 
CTTTCCGTGA AGGTGCCCGA TCCGGAATTC GAAGGGCAGA CAAAAACCAA GTTGGGCAAT 
ACCGAAGTCC GCGGCATTGT CGACAGCCTT GTTGGTGAAG CATTGAGTCA GTATTTGGAA 
TTTAATCCTG CGGTGATTGA TCTTATTCTT GAGAAGGCTA TCCAGGCATT CAATGCAGCT 
GAAGCTGCAC GTCGTGCTCG AGAATTAGTG CGCCGCAAAA GCGTACTTGA GAGTTCTACG 
TTGCCAGGAA AACTGGCTGA TTGCAGTTCT AGGGACCCCT CGGAATCAGA GATTTACATC 
GTGGAGGGCG ACTCTGCTGG TGGCTCTGCA AAGCAGGGCC GAGATCGTCG CTTTCAAGCA 
ATCCTGCCCT TGCGCGGTAA GATCTTAAAT ATTGAGAAAA CAGATGATGC TAAAATATAT 
AAAAATACAG AGATCCAGGC GCTGATTACT GCGCTTGGAT TAGGCATCAA AGGAGAAGAA 
TTTGATGCAA AAAATCTTAG ATATCACCGT GTGGTGATCA TGACTGATGC TGATGTTGAC 
GGTGCTCATA TTCGTACGCT GATACTTACA TTTTTCTACC GCTACCAGAA AGAATTAGTG 
GAAGGTGGTT ATATCTATAT TGCGTGCCCT CCTCTTTATA AGGTTGAGCG AGGTAAGAAC 
CATACCTATT GCTACAACGA GGCTGATTTA CAGACGACAC TCTCAGGCTT CCCCGAGAAG 
GCCAACTACA CCATTCAGCG CTTTAAGGGT CTCGGCGAAA TGATGCCAAA GCAGTTGTGG 
GAGACCACCA TGGACCCTTC TACCCGGATG ATGAAGCGGG TGGAGGTTCA GGATGCATTA 
GAGGCTGATC GTATCTTCAC AATTTTGATG GGCGACAAGG TTGCTCCCCG CCGGGAGTTC 
ATTGAAACCC ACAGCGCTGA GCTCGATATG GCAGCGTTAG ATATCTGA 

 

Protein sequence

MSEDSKVQAA YGAEQIQVLE GLEPVRKRPG MYIGSTGPRG LHHLVFEVVD NSVDEALAGH 
CDEILVVLGP DGSASIADNG RGIPTDVHSR TGKSALETVL TVLHAGGKFG SGGYKVSGGL 
HGVGVSVVNA LSEWVEVTVR RQGQVHRQRF ERGTAIGSLR SEAQPASEKG RTGTSVCFKP 
DEEIFTVGIV FDYATLSARL RELAYLNGGV RIVFRDERQP VLDAEGAPHE EVYFYEGGIK 
EYVTYMNAEK DALHPEIIYV NSEKDNVQVE AALQWCVDAY SDSILGFANN IRTVDGGTHI 
EGLKTVLTRT LNTFARKRGK RKEADSNLAG ENIREGLTAV LSVKVPDPEF EGQTKTKLGN 
TEVRGIVDSL VGEALSQYLE FNPAVIDLIL EKAIQAFNAA EAARRARELV RRKSVLESST 
LPGKLADCSS RDPSESEIYI VEGDSAGGSA KQGRDRRFQA ILPLRGKILN IEKTDDAKIY 
KNTEIQALIT ALGLGIKGEE FDAKNLRYHR VVIMTDADVD GAHIRTLILT FFYRYQKELV 
EGGYIYIACP PLYKVERGKN HTYCYNEADL QTTLSGFPEK ANYTIQRFKG LGEMMPKQLW 
ETTMDPSTRM MKRVEVQDAL EADRIFTILM GDKVAPRREF IETHSAELDM AALDI