Gene P9303_01171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_01171 
Symbol 
ID4777172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand- 
Start bp116758 
End bp117720 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content36% 
IMG OID640085616 
Productnucleoside-diphosphate-sugar pyrophosphorylase 
Protein accessionYP_001016137 
Protein GI124021830 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.469371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGTAG TAGTTGATGA TAAGAAGCGA ATGCTTGGCT CTATAACTGA TGGAGATGTA 
AGGAGGGGAT TGCTTCGTGG TGAATCATTG CAATCGAAGG CTTATAAAAT AATGAATCAT 
AATTATAGGT TTATGTACAA CGATAGTGAT GAATCTAATG CATACGAGAT CATGAAAAAG 
GAATCACTAC GATATATACC AATACTAGAC AAAGACGGAG TAATTAAAAG AATTATATCA 
TTAAATGAAT TTTTAGAACC TGAGAAAATA AGAAACCCTG TTGTGATTAT GGCAGGCGGA 
AAAGGGATGC GATTACGGCC ACTTACAGAG GATTGTCCTA AACCAATGCT CTTGGTTGGA 
GGCAAGCCGA TGTTAAAAAT CCTATTAGAA CAGTTTATAG CTAGTGGATT TGAAGAGTTT 
TACTTTTCAG TAAATTATTT AAAAGATAAG ATAATTAATC ATTTTGAAAA TGGAGAAAGG 
TGGGGTGTCA ATATAAGATA CATAAATGAA GACAAGCCGT TAGGGACTGC TGGTTCTTTG 
AAGTTACTAC CAAGTAATAT TAAAAGGCCT TTTATAGTTA TAAATGGAGA TGTTCTTACT 
AGGCTAAATA CAATTCAATT GCTACGGTTT CATATAGATC ATGATGCCTT AGCGACGATA 
TGTGTACGCG AATATGAAAT GAAAGTACCA TTTGGTGTAG TTCAGGTTGA CGGGGTAGAA 
CTTAAAGGGT TCAAAGAAAA GCCAAGAATA CGACAACTTG TCAATGCGGG TATATATGTC 
ATTAACCCTG CATTGATAGA GTCTATTAAG GACGGCCAAG TAATAGATAT GCCTGAACTA 
CTGCTCAATG AAAGTAATGA ATCAAGACGC GTCACTGTTT ACCCTATTCA TGAATATTGG 
TTAGACGTAG GAAGACCAGA GAGTCTAGAA GAGGCTCATG CGACCTGGGA AGAATTAAAG 
TGA
 
Protein sequence
MVVVVDDKKR MLGSITDGDV RRGLLRGESL QSKAYKIMNH NYRFMYNDSD ESNAYEIMKK 
ESLRYIPILD KDGVIKRIIS LNEFLEPEKI RNPVVIMAGG KGMRLRPLTE DCPKPMLLVG 
GKPMLKILLE QFIASGFEEF YFSVNYLKDK IINHFENGER WGVNIRYINE DKPLGTAGSL 
KLLPSNIKRP FIVINGDVLT RLNTIQLLRF HIDHDALATI CVREYEMKVP FGVVQVDGVE 
LKGFKEKPRI RQLVNAGIYV INPALIESIK DGQVIDMPEL LLNESNESRR VTVYPIHEYW 
LDVGRPESLE EAHATWEELK