Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_01001 |
Symbol | rfaE |
ID | 4775992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | + |
Start bp | 99327 |
End bp | 100838 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640085599 |
Product | putative ADP-heptose synthase |
Protein accession | YP_001016120 |
Protein GI | 124021813 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0615] Cytidylyltransferase [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain [TIGR02198] rfaE bifunctional protein, domain I |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.630367 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAA ATATGACAGA CACCATTAGC ATTAGGGATA TAGGAACAGT TCTTGACTCT GTTCTAGCTT ATGGCCATTT TAACTCTGTA CACCCTGGTC ATATCAGGCA TCTAAAATCT GCTAAGGAAA TAGGAACAAA GGTCGTTGTT GCGGTAATCG GTGATCAATC AGATTCGGTT AAAAATTTCT TTTCACAGAC CGAAAGAGCT GAGTCCTTAG CCCTTCTGAA ATTAGCTGAC ATCATCGTAT TACTGGATGG TGAGGAACTT GATGTAGCGA TTGAAAAAAT AAGACCAAAC ACAGTACTTT TAGGGAAGGA ACATCAAAGA ACTACCAATA AGAACATCAT GGAAGCTATA AAAACTCAGA AGCGATTAGG CGGGGTTGTT AAATATGATG CAGGCGAAAC ACATTATGCA ACTTCAGAAC TATTGGGTTT TTCGCAAGCA GATATAAGAA ATGAAAGAAC TGCTAAGTTC TTAGAAACAT GTAGACGCCA ATCCATTCAA GAAGATCAAT TAATTGAAGC CACAAGGCTT TGGGCTAATA CTAAAATAGT GGTCATTGGA GATACGATTG TTGATCAATA TGTGGCTTGT GAGGCTCTAG GCTTAAGTGC TGAAGCACCA GTAGTAGTAG TAAGAGAGTT GGAAAATAAG AATTTTGTAG GAGGAGCAGC AATCGTTGCA TCCCATATAA GAGCTCTTGG AGCACAATGC CATTACATCT CTGTAGTGGG TAATGATCAA GAAGCCTCAG ATGTAATCGA AATCCTTAAG GAAAGGGATA TTAGCTTTAA TCTAATTAAG GATAAAACAC GACCAACAAC ATTTAAAAGG AGATATGTAG TTGAGAATCA AAAGCTATTC AGAGTGAGCA GATTAGATGA TAGGTGCTTG AGTCCAGAGA AGGAAGATGA GATAATACAA GCAATTGAGT ATTCATTCCA ATCAGCAAAT GGGGTTGTAG TCTCTGACTT TGTCTATGGA TTACTTACCC CTAGGATTAT TAATCATATC CAAGTGATGG CAAATAAAGA AAACATCATG CTCTTTGGTG ATGTGCAATG TAGCAGTCAG GTTGGCAATA TAGCCAAACT AAAAAATTTT ACTCTCCTAT GCCCAAATGA AAGGGAAGCA AGAATCGCAC TGCAGGATAA GGATTCAGGC ATTGAGAAGA TTAGCCATAA GTTGATCACT GCCACTAGAG CCGAAAAGTT AGTGATGAAG CTTGGTGCTC AAGGATTTAT TGCTTATAAT ATTCAAAATG ATGGCGAATT AAAAAATGAA CCTTTCCCAG CGCTCTCTGT AAACCCAGTT GATGTAACTG GAGCTGGAGA TTCATTATTA GCGGTAATGG CAATAGGATT AGCCAGTGGT CAAGAAATGA TGCTTTGTTC CGCATTGGCT TGCTGTATGG CCTCTACAGC AGTTGATAAT ATGGGCAACA CGCCAATCAC TAAAGCAGAT CTACTAGAAA AGATCAATAG AGTATTCTCT GATGTGATGT AA
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Protein sequence | MTENMTDTIS IRDIGTVLDS VLAYGHFNSV HPGHIRHLKS AKEIGTKVVV AVIGDQSDSV KNFFSQTERA ESLALLKLAD IIVLLDGEEL DVAIEKIRPN TVLLGKEHQR TTNKNIMEAI KTQKRLGGVV KYDAGETHYA TSELLGFSQA DIRNERTAKF LETCRRQSIQ EDQLIEATRL WANTKIVVIG DTIVDQYVAC EALGLSAEAP VVVVRELENK NFVGGAAIVA SHIRALGAQC HYISVVGNDQ EASDVIEILK ERDISFNLIK DKTRPTTFKR RYVVENQKLF RVSRLDDRCL SPEKEDEIIQ AIEYSFQSAN GVVVSDFVYG LLTPRIINHI QVMANKENIM LFGDVQCSSQ VGNIAKLKNF TLLCPNEREA RIALQDKDSG IEKISHKLIT ATRAEKLVMK LGAQGFIAYN IQNDGELKNE PFPALSVNPV DVTGAGDSLL AVMAIGLASG QEMMLCSALA CCMASTAVDN MGNTPITKAD LLEKINRVFS DVM
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