Gene P9303_00961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_00961 
SymbolrfbD 
ID4778579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand+ 
Start bp95972 
End bp96907 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content51% 
IMG OID640085595 
Productputative dTDP-4-dehydrorhamnose reductase 
Protein accessionYP_001016116 
Protein GI124021809 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.578879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTGC GGGTTTTATT AACCGGCTCT AAAGGGCAGT TGGGTCAGGA ATTGATTCGC 
TCTTGTCCAT CAGATGTTGC GTTGGTTGCT TGTGATCGTT CACAGTTAAA TCTTGAACAT 
GCCGATGCTT GTCAAGCCAT CGTTGAAACA CATCGGCCTG ATTGGGTTAT CAATGCAGGC 
GCTTATACAG CTGTTGATCG AGCAGAGCAA GAGCCACGGA TTGCACAAGT TGTGAATGCT 
GATGGGCCGA AGGCCTTGGC AGTGGGCCTG GCTCGTCATG GTGGGCGGAT GTTGCAATTG 
AGTACTGATT TTGTCTTTGA CGGCCAGCAG GGCACCCCAT ATCATCCCCA GCAATGTGTT 
TCGCCACTGG GTGTTTATGG CGCTAGCAAG GCAGCTGGTG AAGAACACGT ACTAAATGTT 
TTGGGTGATC GCGCACATGT GCTGCGAACC AGTTGGCTCT ATGGACCGGT TGGTAGCAAT 
TTTTTGCGCA CGATGTTGAG GCTTCATCAG TCGAAAGCTG CGGCGGGGGA GCCATTGGCG 
GTGGTTTCTG ATCAGGTTGG CTGCCCTACC AGCACCTTGG GCCTGGCCGC AGCCTGTTGG 
CGATTGATTC AGACAGCTAG TCAAGTGCAA GATGAATGGA TCCAAGAGCA GCAGCTGCCA 
TCAATTCTTC ATTGGAGTGA TGCAGGAGCG GCAAGTTGGT ATGACTTTGC TGTAGCTATT 
GGTGAGCTGG GCGTTGCTGC AGGGATGCTT CAACATGCGG CGGATGTCAA ACCCATTACA 
ACTGCCGATT ACCCCACTCC AGCGAGGCGA CCTAGTTACT CTTTGCTTGA TTGCAGTGGT 
AGTTCGGCTG CTCTTGGACT CGAACCAATG TATTGGCGCA ATGAATTGGA AGGAGTATTA 
GGAGAGTTGA TTTCTGCACC TTGTACTTTT AGCTAA
 
Protein sequence
MSVRVLLTGS KGQLGQELIR SCPSDVALVA CDRSQLNLEH ADACQAIVET HRPDWVINAG 
AYTAVDRAEQ EPRIAQVVNA DGPKALAVGL ARHGGRMLQL STDFVFDGQQ GTPYHPQQCV 
SPLGVYGASK AAGEEHVLNV LGDRAHVLRT SWLYGPVGSN FLRTMLRLHQ SKAAAGEPLA 
VVSDQVGCPT STLGLAAACW RLIQTASQVQ DEWIQEQQLP SILHWSDAGA ASWYDFAVAI 
GELGVAAGML QHAADVKPIT TADYPTPARR PSYSLLDCSG SSAALGLEPM YWRNELEGVL 
GELISAPCTF S