Gene P9303_00941 details

Gene Information

• Locus tag: P9303_00941
• Symbol: rfbC
• ID: 4777212
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 94031
• End bp: 94636
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640085593
• Product: dTDP-4-dehydrorhamnose 3,5-epimerase
• Protein accession: YP_001016114
• Protein GI: 124021807
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
• TIGRFAM ID: [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.0683149
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAAGCTG AAGTCCTGAC CTCCGCGGCA GGGATCCATC TAAACGGACC TTTGTTGTTG 
TCTCCTCAGG TGCATGGCGA TGAAAGAGGA TTTTTCTTTG AGAGTTGGAA TCAGCGTCGT 
TGGCAGGAGG TTTTGGCAAG TCATAGGCAG GAAGCGCCTG AGTTTGTCCA AGACAATCAC 
TCGCGTTCGT CTTGTGGCGT GCTGCGTGGA CTGCACTATC AATTGCCCCC GCATCCCCAG 
GGCAAGCTGG TGCGTTGCGT AGTAGGTGAG ATCTTTGATG TTGCTATTGA TCTGCGCCGT 
TCTTCAGCAA CCTATGGTCA GTGGGCCGGA GCTCATTTGA GTGCTGAGAA CCATCAGCAG 
CTTTGGATAC CGGTTGGCTT TGCCCATGGT TTTCTGACTC TCTCAGAGAG TGCTGAGGTG 
CTTTATAAAG CCACGGATTT CTGGAGTCGC GATTGTGAAC GGGCGATCCG CTGGGATGAT 
CCACGCCTAG GAATTTCCTG GCCTGTTGTT CACGTGGATG GAGATCAGAT TCCAGCATCT 
CTTTCTCAGA AGGATGCTGT TGCTTCTTTG ATGGAGGAGT TGTCTGCAGC TGAAACCTTC 
AAATGA 

 

Protein sequence

MQAEVLTSAA GIHLNGPLLL SPQVHGDERG FFFESWNQRR WQEVLASHRQ EAPEFVQDNH 
SRSSCGVLRG LHYQLPPHPQ GKLVRCVVGE IFDVAIDLRR SSATYGQWAG AHLSAENHQQ 
LWIPVGFAHG FLTLSESAEV LYKATDFWSR DCERAIRWDD PRLGISWPVV HVDGDQIPAS 
LSQKDAVASL MEELSAAETF K