| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_00511 |
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| Symbol | sqdB |
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| ID | 4777312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | - |
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| Start bp | 51843 |
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| End bp | 53039 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640085551 |
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| Product | sulfolipid (UDP-sulfoquinovose) biosynthesis protein |
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| Protein accession | YP_001016073 |
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| Protein GI | 124021766 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGTTT TCGTTCTCGG CGGCGACGGC TTCTGCGGAT GGCCTTGTGC AGTGAACCTC
GCTGATAGGG GTCACGAAGT GTTGATCGTC GACAATCTCA GCCGCCGCAA GATCGATATC
GATCTTGAAG TCGAGTCACT GACACCAATC ACCAGCATTG GTGACCGCCT CAGGGCCTGG
CGAGAAATCG GAGGCAAGCC AATTCGTTTT GAGCACCTAG ACATCGCCCA TCAGTACGAC
CGATTGGTGA CAATGCTCAA AACTGAACGA CCCGATGCGG TGGTTCACTT TGCCGAGCAG
CGTGCAGCTC CCTACTCGAT GAAGAGCAGC TCCACCAAGC GCTATACCGT CGATAACAAC
GTCAACGGCA CTCACAATCT GCTCGCCGCC ATCGTTGAAA GCGGCCTCGA CATCCACATC
GTGCACCTGG GAACGATGGG GGTGTACGGC TACGGCTCGC ACCGCGGAGC CACCATTCCT
GAGGGATACC TCAAAGTGGA AGTGCCCCAG CCCGATGGCA GCCGTTTCGA GGAAGAAATT
CTTCACCCAG CCAGCCCTGG AAGCGTCTAT CACATGACCA AGACGCTCGA TCAACTGCTT
TTCCTCTACT ACAACAAGAA TGACCAAATC AGGATCACCG ACCTTCACCA AGGCATCGTC
TGGGGTACCA ACACTGAAGC AACCGCTAGG GATCCACGCC TAACCAACCG CTTTGATTAC
GACGGTGACT ACGGCACAGT TCTCAACCGC TTCCTGATGC AGGCAGCAAT CGGTTATCCG
CTCACTGTCC ATGGAACAGG AGGTCAAACC CGTGCCTTCA TCCACATCTG CGATTCTGTG
AAGTGCGTAC AACTGGCTCT TGAAAACCCA CCGGCCAAAG GCGAACGAGT CAAGATTTTC
AACCAAATGA CCGAAAGCCA CCAAGTGGGT GAACTTGCCA AGAAGGTAGC TGCCCTAACC
GGCGCCGAAC TAAACCATCT TCCAAACCCA CGCAACGAAG CAGTGGAGAA TGATCTGATT
GTGGATAACC GCTGCTTCAT CGAACTTGGA CTCAAACCAA CCACCCTCGA CGATGGCCTA
CTTGCTGAAG TAGTCGATGT GGCAAAACGC TGGGCAGACC GCTGCGACCG CAGTCGTATC
CCATGTGTAT CGGCCTGGAC TTCGACCCAG GCTGAGGCCA TCAAGCACCC CTCCTAA
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| Protein sequence | MKVFVLGGDG FCGWPCAVNL ADRGHEVLIV DNLSRRKIDI DLEVESLTPI TSIGDRLRAW
REIGGKPIRF EHLDIAHQYD RLVTMLKTER PDAVVHFAEQ RAAPYSMKSS STKRYTVDNN
VNGTHNLLAA IVESGLDIHI VHLGTMGVYG YGSHRGATIP EGYLKVEVPQ PDGSRFEEEI
LHPASPGSVY HMTKTLDQLL FLYYNKNDQI RITDLHQGIV WGTNTEATAR DPRLTNRFDY
DGDYGTVLNR FLMQAAIGYP LTVHGTGGQT RAFIHICDSV KCVQLALENP PAKGERVKIF
NQMTESHQVG ELAKKVAALT GAELNHLPNP RNEAVENDLI VDNRCFIELG LKPTTLDDGL
LAEVVDVAKR WADRCDRSRI PCVSAWTSTQ AEAIKHPS
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