Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_00201 |
Symbol | grpE |
ID | 4777023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | + |
Start bp | 24985 |
End bp | 25698 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640085519 |
Product | heat shock protein GrpE |
Protein accession | YP_001016042 |
Protein GI | 124021735 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGCG ACGCCCCTAC CCCAGCTCAC GATCCTGCTG CTGAGGGTTT AGAGGCTTCC GTGCCTCTGG AATCAGTGGC ATCGATGAAT TCCGACGAGG GTCAGCCTTC AGCTCAATCT GCACCATTAG CGGATAATGA GGCTCGCTTA CAGCAGTTGG AGCAGGAGCA CAGCAGCCTG CGGGAAGAGC ACGAAACTCT TCGTAGTCAG TACATGCGGA TTGCTGCAGA TTTCGATAAT TTCCGCAAAC GTCAGAGTCG CGATCAGGAC GATCTGCGAT TGCAGCTCAT CTGTACTACT TTGAGTGAAA TTCTACCGGT GGTGGACAAT TTTGAGCGAG CTCGTCAGCA ATTAGAGCCT CAGGGAGAGG AGGCCCAGGC TCTTCATCGC AGTTATCAGG GTCTTTATAA ACAGCTTGTT GAGGTGCTCA AGCAATTGGG CGTTGCTTCA ATGCGGGTTG TTGGACAGGC GTTTGATCCC ACGCTCCATG AGGCTGTTTC AAGAGAGCCC AGTGAGGAGC ATCCAGAGGA TGTAGTCACA GAGGAACTTC AGCGTGGATA TCACCTCAAT GGCAGGGTGC TTCGCCATGC TCTTGTGAAG GTGTCTATGG GACCAGGCCC GCAGAGTGGC GCCTCTCCTT CTTCAGCTCA ATCCAATGAT GACTCCACTG CAACTTTTCA AGGTGAGGCA GATCCTGCCG AGCCAGGGGT CTGA
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Protein sequence | MSGDAPTPAH DPAAEGLEAS VPLESVASMN SDEGQPSAQS APLADNEARL QQLEQEHSSL REEHETLRSQ YMRIAADFDN FRKRQSRDQD DLRLQLICTT LSEILPVVDN FERARQQLEP QGEEAQALHR SYQGLYKQLV EVLKQLGVAS MRVVGQAFDP TLHEAVSREP SEEHPEDVVT EELQRGYHLN GRVLRHALVK VSMGPGPQSG ASPSSAQSND DSTATFQGEA DPAEPGV
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