Gene P9303_00001 details

Gene Information

• Locus tag: P9303_00001
• Symbol: dnaN
• ID: 4776182
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 205
• End bp: 1371
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640085499
• Product: DNA polymerase III subunit beta
• Protein accession: YP_001016022
• Protein GI: 124021715
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog)
• TIGRFAM ID: [TIGR00663] DNA polymerase III, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.652632
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAACTGG TTTGTTCACA GGCTGAACTC AATACAGCAC TACAGCTCGT TAGCAGAGCC 
GTGGCCTCAC GACCCACTCA TCCGGTGCTA GCTAACGTGC TTCTCACTGC TGATGCTGGC 
ACTGATCGTC TCAGCCTCAC GGGTTTTGAT CTGAGCCTTG GTATTCAAAC GGCATTGACT 
GCCTCGGTGG AATCCAGTGG TGCGATTACT TTGCCTGCGC GCCTATTAGG GGAAATTGTT 
TCAAGGCTTT CAAGTGATTC GCCTATCACT TTGGCCACTG ATGAGGCTGG TGAACAGGTA 
GAGCTCAAAA GTTTAAGCGG GAGTTATCAG ATGCGTGGGA TGTCTGCTGA TGATTTTCCT 
GAATTACCTC TTGTTGAAAG TGGTAAGGCT GTCAAGGTGA ATGCGAGGGC TCTTTTGACA 
GCTCTTCGAG GAACTCTTTT TGCTAGCAGT TCAGATGAAG CCAAACAGTT ACTAACAGGA 
GTTCATTTGC ATTTTGATGG TAAAGCGATG GAAGCAGCGG CAACTGATGG TCATCGCCTT 
GCAGTTTTAA GCTTGGCAGA TGCCTTAGAT GTTGAGACTA CGCTTTCATC TGACACGGAT 
GATGAAGGTG AGAATTTTGC GGTAACGCTT CCTTCTCGTT CTTTGCGGGA AGTGGAGCGC 
TTGATCGCCG GATGGCGTAG TGATGATCAA GTGAGTTTGT TTTGTGATAA AGGTCAGGTG 
GTATTTTTAG CTGCTGATCA AGTTGTAACT AGTCGAACAT TAGACGGAAC TTATCCTAAC 
TATCGTCAGT TAATTCCTGA TGGTTTTGCT CGGAGCTTTG ATGTTGATCG GCGTGCTTTT 
ATTTCAGCTT TGGAACGGAT AGCTGTATTA GCTGATCAAC ATAACAATGT TGTAAAGGTT 
AGTGGTGACA GTACTTCTGA GCTTCTACAA ATTAGTGCTG ATGCTCAGGA TGTAGGCAGT 
GGCTCTGAAT CACTATCGGC TGAATTTACT GGTGATTCTG TTCAGATTGC TTTTAATGTT 
CGTTATGTAC TAGATGGTTT GAAGGTGATG GATAGTGATC GTATTGTACT GCGTTGTAAT 
GCTCCAACCA CACCTGCAAT TATTTCACCA AAGGATGATG ATATTGGCTT TACGTATTTG 
GTGATGCCAG TACAAATTCG TTCTTGA 

 

Protein sequence

MKLVCSQAEL NTALQLVSRA VASRPTHPVL ANVLLTADAG TDRLSLTGFD LSLGIQTALT 
ASVESSGAIT LPARLLGEIV SRLSSDSPIT LATDEAGEQV ELKSLSGSYQ MRGMSADDFP 
ELPLVESGKA VKVNARALLT ALRGTLFASS SDEAKQLLTG VHLHFDGKAM EAAATDGHRL 
AVLSLADALD VETTLSSDTD DEGENFAVTL PSRSLREVER LIAGWRSDDQ VSLFCDKGQV 
VFLAADQVVT SRTLDGTYPN YRQLIPDGFA RSFDVDRRAF ISALERIAVL ADQHNNVVKV 
SGDSTSELLQ ISADAQDVGS GSESLSAEFT GDSVQIAFNV RYVLDGLKVM DSDRIVLRCN 
APTTPAIISP KDDDIGFTYL VMPVQIRS