Gene NATL1_21811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_21811 
SymbolacnB 
ID4780291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1839141 
End bp1841741 
Gene Length2601 bp 
Protein Length866 aa 
Translation table11 
GC content38% 
IMG OID640085479 
Productbifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 
Protein accessionYP_001016001 
Protein GI124026886 
COG category[C] Energy production and conversion 
COG ID[COG1049] Aconitase B 
TIGRFAM ID[TIGR00117] aconitate hydratase 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.24059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAAG ATTATTTATC ACATGTTGCA GAAAGAGAAG CTTTGGGGAT TCCTCCACTT 
CCTTTAGATG CAAAACAGAC TCAAGTTTTA ACAGAGTTAT TAGAAAAACC AGATCAAGGT
ATCGATCAAA ACTTCTTACT TGATCTTCTT GTTAATCGAA TTCCTCCCGG AGTTGATCAA
GCCTCTTATG TCAAAGCGAC TTGGCTTAGC TCAATTGCTC AAGAAGAATC AAAAAGTCCG
TTAGTAAATC CTCTAAAAGC AACTGAGCTT TTAGGTACAA TGATTGGCGG ATATAATGTA
GCAGCGTTAA TTGAAATACT AAAATCTAAT AATAAAGAAT TAGCGACTTC AGCCTGTTGT
GCATTAAGTA ATACCCTTTT AGTTTATGAC GCTTTAAACG ACATTTTAGA ATTAGCAAAA
ACTAATATTT ATGCAGAAAA AGTTATCAAT AGCTGGTCCA ATGGAGAATG GTTCACTAAT
AAACAACCAT TAGCTCAAGA AATAACAGTA ACAGTATTTA AAGTTGAAGG AGAAACAAAT
ACAGACGACC TCTCTCCAGC AACTCATGCC ACAACAAGAC CAGATATTCC TTTACATGCT
CTAGCGATGC TAGAGACTCG AGATCCAAAT GGTTTAAGCA CTATTGAAGA ATTAAAAAAG
AAAGGATATC CAATTGCATA TGTTGGCGAT GTCGTTGGAA CAGGAAGCTC TAGAAAGTCA
GCAATTAACT CAGTTCTTTG GCATACAGGA CAAGACATAC CTTACGTACC AAATAAAAGA
GGGAGTGGGG TTGTAATAGG AGGCAAAATT GCTCCTATTT TCTTTAATAC TGCTGAAGAT
TCAGGTGCGC TTCCAATTGA ATGCGATGTA AGCAATCTCA AAACAGGTGA TGTAATTACT
ATTTTCCCTT ACAAAGGAGA AGTTAGAAGA AGTAAAAATA AGACAAACAG TGGAGAACTT
CTATCAAAAT TTGACTTAAA ACCACAAACT ATTACTGATG AAGTAAGAGC GGGTGGGCGA
ATTCCTTTAA TGATTGGAAG AGCTTTGACA GACAAAGTTA GAACAAAATT AAAACTTCCA
CCCTCTACTC TTTTTATTCG TCCTGGTCAG CCACCTGCAT CAAAGTATGG GTTTACACAA
GCTCAAAAAA TGGTTGGAAA AGCTTGCGGT TTAGAAGGCG TTCTCCCTGG TGCAAGTTGT
GAGCCAATAA TGACAACAGT TGGTAGTCAA GACACTACTG GTCCGATGAC TAGAGATGAA
ATGAAAGAAT TAGCCTGTTT AGGATTTTCT GCTGATTTAG TTATGCAGAG TTTCTGTCAT
ACCGCAGCAT ATCCTAAGCC TGTTGATATC AAAACTCAAA AAGAACTCCC TGATTTTTTT
GCTGAAAGAG GAGGAATAGC ATTAAAACCC GGTGATGGAA TTATTCACAG TTGGCTAAAC
AGGATGCTTT TGCCGGACAC AGTCGGGACA GGTGGCGATA GTCATACACG ATTCCCGTTG
GGCATCTCAT TTCCAGGAGG TTCGGGAGTG GTGGCATTTG CGGCAGCCAT TGGTTCCATG
CCTTTAGATA TGCCAGAGTC AGTTCTTGTT CGTTTTAAAG GGTCTTTACA AACTGGTGTC
ACTTTAAGAG ATGTAGTTAA TGCCATTCCG TGGATGGCCA TACAAAAAGG TCTTCTGACC
GTCGCAAAAG CAAACAAAGT TAATGTGTTC AATGGAAAGA TATTAGAAAT TGAAGGTCTA
CCAAACCTAA AATTAGAGCA AGCCTTTGAG TTGACTGATG CAAGTGCAGA AAGATCTTGT
GCTGGATGTA CTATTCAACT GTCTGAATCA ACAATCAGTG AATATTTAAA AAGCAATATT
GTTTTACTTA AAAATATGAT TGCTAGGGGA TATAAAGATG CCCGAACAAT AAGTAGAAGA
ATTAAAGAAA TGGAAGATTG GTTAAAAAAA CCAAATTTAC TATCAGCCGA CTCAAATGCT
CAATACTCAG AAACCATCGA AATAGACTTG AATAAACTGA AAGAACCTGT TTTAGCTTGC
CCTAATGATC CTGATAACGT CAAACTTTTA AGCGAAGTCG CAGGCACTCC CATTCAAGAA
GTTTTTATTG GTTCGTGTAT GACTAATATT GGTCATTATC GAGCCGCTGC AAAAATTCTC
GAAGGAGAGG GGAAGATATC AGCACGATTA TGGGTATGTC CGCCAACACG AATGGACGAA
GAAATTTTGA AAAAAGAAGG ATACTACGAG ATTTTTGAAA AAGCTGGTAG CCGAATGGAA
ATGCCTGGTT GTTCTCTATG CATGGGCAAT CAAGCTCGTG TAGAAGATAA TTCAACTGTT
TTCTCAACAA GTACAAGAAA TTTCAACAAC AGATTAGGAA AAGGAGCTCA AGTGTTCTTA
GGAAGTGCAG AATTGGCTGC TGTTTGCGCT TTGATAGGTC ATATCCCTAC AACTGATGAA
TATCTTGCAA TAGCTTCCAA AAAAGTTTCA CCAATAACTG ACGAAATCTA CAGATACTTA
AACTTTAATG AAATACCAAA CTTTATCGAA GATGGTCGTG TAATAACAAA AGAAGAAGAG
GCCTCTATTT TACAAACCTA A
 
Protein sequence
MLKDYLSHVA EREALGIPPL PLDAKQTQVL TELLEKPDQG IDQNFLLDLL VNRIPPGVDQ 
ASYVKATWLS SIAQEESKSP LVNPLKATEL LGTMIGGYNV AALIEILKSN NKELATSACC
ALSNTLLVYD ALNDILELAK TNIYAEKVIN SWSNGEWFTN KQPLAQEITV TVFKVEGETN
TDDLSPATHA TTRPDIPLHA LAMLETRDPN GLSTIEELKK KGYPIAYVGD VVGTGSSRKS
AINSVLWHTG QDIPYVPNKR GSGVVIGGKI APIFFNTAED SGALPIECDV SNLKTGDVIT
IFPYKGEVRR SKNKTNSGEL LSKFDLKPQT ITDEVRAGGR IPLMIGRALT DKVRTKLKLP
PSTLFIRPGQ PPASKYGFTQ AQKMVGKACG LEGVLPGASC EPIMTTVGSQ DTTGPMTRDE
MKELACLGFS ADLVMQSFCH TAAYPKPVDI KTQKELPDFF AERGGIALKP GDGIIHSWLN
RMLLPDTVGT GGDSHTRFPL GISFPGGSGV VAFAAAIGSM PLDMPESVLV RFKGSLQTGV
TLRDVVNAIP WMAIQKGLLT VAKANKVNVF NGKILEIEGL PNLKLEQAFE LTDASAERSC
AGCTIQLSES TISEYLKSNI VLLKNMIARG YKDARTISRR IKEMEDWLKK PNLLSADSNA
QYSETIEIDL NKLKEPVLAC PNDPDNVKLL SEVAGTPIQE VFIGSCMTNI GHYRAAAKIL
EGEGKISARL WVCPPTRMDE EILKKEGYYE IFEKAGSRME MPGCSLCMGN QARVEDNSTV
FSTSTRNFNN RLGKGAQVFL GSAELAAVCA LIGHIPTTDE YLAIASKKVS PITDEIYRYL
NFNEIPNFIE DGRVITKEEE ASILQT