Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_21811 |
Symbol | acnB |
ID | 4780291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 1839141 |
End bp | 1841741 |
Gene Length | 2601 bp |
Protein Length | 866 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640085479 |
Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
Protein accession | YP_001016001 |
Protein GI | 124026886 |
COG category | [C] Energy production and conversion |
COG ID | [COG1049] Aconitase B |
TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.24059 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAAAG ATTATTTATC ACATGTTGCA GAAAGAGAAG CTTTGGGGAT TCCTCCACTT CCTTTAGATG CAAAACAGAC TCAAGTTTTA ACAGAGTTAT TAGAAAAACC AGATCAAGGT ATCGATCAAA ACTTCTTACT TGATCTTCTT GTTAATCGAA TTCCTCCCGG AGTTGATCAA GCCTCTTATG TCAAAGCGAC TTGGCTTAGC TCAATTGCTC AAGAAGAATC AAAAAGTCCG TTAGTAAATC CTCTAAAAGC AACTGAGCTT TTAGGTACAA TGATTGGCGG ATATAATGTA GCAGCGTTAA TTGAAATACT AAAATCTAAT AATAAAGAAT TAGCGACTTC AGCCTGTTGT GCATTAAGTA ATACCCTTTT AGTTTATGAC GCTTTAAACG ACATTTTAGA ATTAGCAAAA ACTAATATTT ATGCAGAAAA AGTTATCAAT AGCTGGTCCA ATGGAGAATG GTTCACTAAT AAACAACCAT TAGCTCAAGA AATAACAGTA ACAGTATTTA AAGTTGAAGG AGAAACAAAT ACAGACGACC TCTCTCCAGC AACTCATGCC ACAACAAGAC CAGATATTCC TTTACATGCT CTAGCGATGC TAGAGACTCG AGATCCAAAT GGTTTAAGCA CTATTGAAGA ATTAAAAAAG AAAGGATATC CAATTGCATA TGTTGGCGAT GTCGTTGGAA CAGGAAGCTC TAGAAAGTCA GCAATTAACT CAGTTCTTTG GCATACAGGA CAAGACATAC CTTACGTACC AAATAAAAGA GGGAGTGGGG TTGTAATAGG AGGCAAAATT GCTCCTATTT TCTTTAATAC TGCTGAAGAT TCAGGTGCGC TTCCAATTGA ATGCGATGTA AGCAATCTCA AAACAGGTGA TGTAATTACT ATTTTCCCTT ACAAAGGAGA AGTTAGAAGA AGTAAAAATA AGACAAACAG TGGAGAACTT CTATCAAAAT TTGACTTAAA ACCACAAACT ATTACTGATG AAGTAAGAGC GGGTGGGCGA ATTCCTTTAA TGATTGGAAG AGCTTTGACA GACAAAGTTA GAACAAAATT AAAACTTCCA CCCTCTACTC TTTTTATTCG TCCTGGTCAG CCACCTGCAT CAAAGTATGG GTTTACACAA GCTCAAAAAA TGGTTGGAAA AGCTTGCGGT TTAGAAGGCG TTCTCCCTGG TGCAAGTTGT GAGCCAATAA TGACAACAGT TGGTAGTCAA GACACTACTG GTCCGATGAC TAGAGATGAA ATGAAAGAAT TAGCCTGTTT AGGATTTTCT GCTGATTTAG TTATGCAGAG TTTCTGTCAT ACCGCAGCAT ATCCTAAGCC TGTTGATATC AAAACTCAAA AAGAACTCCC TGATTTTTTT GCTGAAAGAG GAGGAATAGC ATTAAAACCC GGTGATGGAA TTATTCACAG TTGGCTAAAC AGGATGCTTT TGCCGGACAC AGTCGGGACA GGTGGCGATA GTCATACACG ATTCCCGTTG GGCATCTCAT TTCCAGGAGG TTCGGGAGTG GTGGCATTTG CGGCAGCCAT TGGTTCCATG CCTTTAGATA TGCCAGAGTC AGTTCTTGTT CGTTTTAAAG GGTCTTTACA AACTGGTGTC ACTTTAAGAG ATGTAGTTAA TGCCATTCCG TGGATGGCCA TACAAAAAGG TCTTCTGACC GTCGCAAAAG CAAACAAAGT TAATGTGTTC AATGGAAAGA TATTAGAAAT TGAAGGTCTA CCAAACCTAA AATTAGAGCA AGCCTTTGAG TTGACTGATG CAAGTGCAGA AAGATCTTGT GCTGGATGTA CTATTCAACT GTCTGAATCA ACAATCAGTG AATATTTAAA AAGCAATATT GTTTTACTTA AAAATATGAT TGCTAGGGGA TATAAAGATG CCCGAACAAT AAGTAGAAGA ATTAAAGAAA TGGAAGATTG GTTAAAAAAA CCAAATTTAC TATCAGCCGA CTCAAATGCT CAATACTCAG AAACCATCGA AATAGACTTG AATAAACTGA AAGAACCTGT TTTAGCTTGC CCTAATGATC CTGATAACGT CAAACTTTTA AGCGAAGTCG CAGGCACTCC CATTCAAGAA GTTTTTATTG GTTCGTGTAT GACTAATATT GGTCATTATC GAGCCGCTGC AAAAATTCTC GAAGGAGAGG GGAAGATATC AGCACGATTA TGGGTATGTC CGCCAACACG AATGGACGAA GAAATTTTGA AAAAAGAAGG ATACTACGAG ATTTTTGAAA AAGCTGGTAG CCGAATGGAA ATGCCTGGTT GTTCTCTATG CATGGGCAAT CAAGCTCGTG TAGAAGATAA TTCAACTGTT TTCTCAACAA GTACAAGAAA TTTCAACAAC AGATTAGGAA AAGGAGCTCA AGTGTTCTTA GGAAGTGCAG AATTGGCTGC TGTTTGCGCT TTGATAGGTC ATATCCCTAC AACTGATGAA TATCTTGCAA TAGCTTCCAA AAAAGTTTCA CCAATAACTG ACGAAATCTA CAGATACTTA AACTTTAATG AAATACCAAA CTTTATCGAA GATGGTCGTG TAATAACAAA AGAAGAAGAG GCCTCTATTT TACAAACCTA A
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Protein sequence | MLKDYLSHVA EREALGIPPL PLDAKQTQVL TELLEKPDQG IDQNFLLDLL VNRIPPGVDQ ASYVKATWLS SIAQEESKSP LVNPLKATEL LGTMIGGYNV AALIEILKSN NKELATSACC ALSNTLLVYD ALNDILELAK TNIYAEKVIN SWSNGEWFTN KQPLAQEITV TVFKVEGETN TDDLSPATHA TTRPDIPLHA LAMLETRDPN GLSTIEELKK KGYPIAYVGD VVGTGSSRKS AINSVLWHTG QDIPYVPNKR GSGVVIGGKI APIFFNTAED SGALPIECDV SNLKTGDVIT IFPYKGEVRR SKNKTNSGEL LSKFDLKPQT ITDEVRAGGR IPLMIGRALT DKVRTKLKLP PSTLFIRPGQ PPASKYGFTQ AQKMVGKACG LEGVLPGASC EPIMTTVGSQ DTTGPMTRDE MKELACLGFS ADLVMQSFCH TAAYPKPVDI KTQKELPDFF AERGGIALKP GDGIIHSWLN RMLLPDTVGT GGDSHTRFPL GISFPGGSGV VAFAAAIGSM PLDMPESVLV RFKGSLQTGV TLRDVVNAIP WMAIQKGLLT VAKANKVNVF NGKILEIEGL PNLKLEQAFE LTDASAERSC AGCTIQLSES TISEYLKSNI VLLKNMIARG YKDARTISRR IKEMEDWLKK PNLLSADSNA QYSETIEIDL NKLKEPVLAC PNDPDNVKLL SEVAGTPIQE VFIGSCMTNI GHYRAAAKIL EGEGKISARL WVCPPTRMDE EILKKEGYYE IFEKAGSRME MPGCSLCMGN QARVEDNSTV FSTSTRNFNN RLGKGAQVFL GSAELAAVCA LIGHIPTTDE YLAIASKKVS PITDEIYRYL NFNEIPNFIE DGRVITKEEE ASILQT
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