| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_21501 |
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| Symbol | lig |
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| ID | 4780722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 1807011 |
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| End bp | 1809083 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640085447 |
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| Product | NAD-dependent DNA ligase |
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| Protein accession | YP_001015970 |
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| Protein GI | 124026855 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.786913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATTCAA ACTTTAATCA ACATTTTGAA CGTATAAAAG AGCTTAGAGC TTTACTCAAT
AAAGCAAATT ACTCCTACTA TGTATTAGAT TCACCAGAGA TAGACGATGC TGTTTATGAT
CAACTCTATC GAGAATTAAT TGAAATTGAA AATATTCACC CATCTTTAAT TACTGATGAT
AGCCCCTCAC AAAGATTAGG AGGTGTTCCT TCTAAAGGAT TCAAAAATGT TGAGCATAAT
ATTCCTCTTT TAAGTCTAGA TAATGCTTTT AATTTAAACG AATTAGAATC ATGGTACGGA
AGGATCAGCA AATTAATAAG TTCAGAAAAT AAAAATATCA AAAAAGTTGA TGATCTAGAA
CTTATATGTG AATTAAAAAT TGATGGAAAT GCTATTTCAT TAAGATATGA AAATGGAATT
TTAACTAGAG CAGCAACTCG TGGAGATGGA AAAACTGGAG AAGATATCAC TACTAATATC
AGAACAATTT CGACAATTCC TTTACGTTTA TTATTAGAAA ATCCACCCTC ATGGGTTGAA
ATTAGAGGCG AGGCTTTCAT GCCCAATAAT ATATTTAATA AACTCAATAT TGAAAGAAAA
AATACTGATC AACCACTCTT TGCAAATCCT AGAAACTCTT GTGCTGGAAC ATTAAGACAA
TTAGATCCCA AAATAGTTGC ATCTAGAAAA CTTGACTTCT TCGCATACAG TCTTTATTTT
CCAGAAAATT GGGAGCCAAC TGATAACAAT TTTAAAAAAC CAATTTCTCA ATCTGAATCG
CTTGAGTTTT TAAAAAATAT TGGGTTTAAA GTTAATACTA CATATGAAAC AACAAAAACA
TTAAATGAAG CAAATAAGTA TTACAAATAT TGGGAAGTTA AAAAAGATTT TTTAGCTTAT
GCAACTGATG GCATAGTAGT AAAAATAGAT AAATTTGACA TACAAAATCT ATTAGGAGCA
ACCAATAAAG CTCCAAGATG GGCAATTGCT GTCAAATATC CAGCGGAAGA GAAAGCAACC
AAGTTAAGAA AGATAATTTT CCAAGTAGGT CGCTCTGGTG CAGTTACACC AGTAGCAGAA
TTTGAATCGA TAGAGCTTGC AGGAACATCT GTGAATCGTG CAACTCTTCA TAATGCAAAA
AGACTTGCCT CTTTAGATCT TCATTATGAA GACACAATAA TTGTTCGAAA AGCCGGGGAG
ATTATTCCTG AAGTGATTAG GGTTATAAAA GAGTTTAGAA AAGTTGATGC AAAATTAGTT
CAACTTCCTC AAAACTGCCC AGAATGTAAT TCGAAGTTAA TTCTAGAATC AAACGAAGCA
ATTACAAAAT GTATTAATTA TGGATGCGAA GCAAAATTAA AAGGTCTTTT ACGTCATTGG
GTCAGTAAAG GTTCAATGAA CATAGATGGA TTAGGTGAAA AAATTATTAA TCAATTAGTA
AATGAAGGAT ATGTAAAGTC AATCGCTGAT TTATACAAAC TTGAAATTGA TTCCCTTTTA
GAGCTTGAAA GGTTTGGTGA AAAATCTGCA AATAATTTAC TAATAGAAAT TAACGAATCT
AAAAACAAAA ATTGGCACAA ACAACTGTAC GGCTTAGGGA TACCTCACAT AGGAGAAGCG
AATGCTAAAT CTCTTTCGAA CAACTTTAAT AGTATCGAAG AACTTAATGC TATTGCGAAG
GAGTCACCTG AAAAAATATC CAATATTTAT GGATTTGGGA ATGAGATGAA AGATTCAATA
GTTAAGTGGT TTGATGATTC TAATAATCAA ACCTTAATTA AAGAATTAAA AGCAATTGGA
TTTTCTCTAA AAGAGAGTTT AGATTCAAAC TACAATTCAA ATCAATCAAA TGTTTTTGAT
GGTAAGAGTT TTGTCTTAAC AGGGACTTTG GATTCACTTA CAAGAGATGA AGCAAAAGAA
TTGATAGAAA GTGCTGGAGG GAAAGTCAGC TCTTCAATTA GTAAAAAAAC AGACTTCTTA
GTATCAGGAG AAAAAGCTGG AAGTAAATTA AACAAAGCAC AAGAGCTTGG AGTAAAAATA
ATTAACGAAA ATGAATTGAA GCTATTACTA TAA
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| Protein sequence | MNSNFNQHFE RIKELRALLN KANYSYYVLD SPEIDDAVYD QLYRELIEIE NIHPSLITDD
SPSQRLGGVP SKGFKNVEHN IPLLSLDNAF NLNELESWYG RISKLISSEN KNIKKVDDLE
LICELKIDGN AISLRYENGI LTRAATRGDG KTGEDITTNI RTISTIPLRL LLENPPSWVE
IRGEAFMPNN IFNKLNIERK NTDQPLFANP RNSCAGTLRQ LDPKIVASRK LDFFAYSLYF
PENWEPTDNN FKKPISQSES LEFLKNIGFK VNTTYETTKT LNEANKYYKY WEVKKDFLAY
ATDGIVVKID KFDIQNLLGA TNKAPRWAIA VKYPAEEKAT KLRKIIFQVG RSGAVTPVAE
FESIELAGTS VNRATLHNAK RLASLDLHYE DTIIVRKAGE IIPEVIRVIK EFRKVDAKLV
QLPQNCPECN SKLILESNEA ITKCINYGCE AKLKGLLRHW VSKGSMNIDG LGEKIINQLV
NEGYVKSIAD LYKLEIDSLL ELERFGEKSA NNLLIEINES KNKNWHKQLY GLGIPHIGEA
NAKSLSNNFN SIEELNAIAK ESPEKISNIY GFGNEMKDSI VKWFDDSNNQ TLIKELKAIG
FSLKESLDSN YNSNQSNVFD GKSFVLTGTL DSLTRDEAKE LIESAGGKVS SSISKKTDFL
VSGEKAGSKL NKAQELGVKI INENELKLLL
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